STRINGSTRING
AKG20896.1 AKG20896.1 AKG21080.1 AKG21080.1 AKG24503.1 AKG24503.1 AKG21081.1 AKG21081.1 AKG21082.1 AKG21082.1 AKG21083.1 AKG21083.1 AKG21085.1 AKG21085.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AKG20896.1Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology. (146 aa)
AKG21080.1Abortive infection protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
AKG24503.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)
AKG21081.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (112 aa)
AKG21082.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (75 aa)
AKG21083.1RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. (409 aa)
AKG21085.1Dgpfaetke family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (113 aa)
Your Current Organism:
Calothrix sp. 3363
NCBI taxonomy Id: 1337936
Other names: C. sp. 336/3, Calothrix sp. 336/3
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