5 items (Elizabethkingia anophelis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rplM	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (151 aa)
	rpsI	SSU ribosomal protein S9p (S16e); Belongs to the universal ribosomal protein uS9 family. (128 aa)
	rpsB	SSU ribosomal protein S2p (SAe); Belongs to the universal ribosomal protein uS2 family. (252 aa)
	rpsO	SSU ribosomal protein S15p (S13e); Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (89 aa)
	rpsP	SSU ribosomal protein S16p; Belongs to the bacterial ribosomal protein bS16 family. (190 aa)

Your Current Organism:

Elizabethkingia anophelis

NCBI taxonomy Id: 1338011
Other names: E. anophelis NUHP1, Elizabethkingia anophelis NUHP1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rpsB	BD94_0248	BD94_0250	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S2p (SAe); Belongs to the universal ribosomal protein uS2 family.	0.995
rplM	rpsI	BD94_0248	BD94_0249	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S9p (S16e); Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	rpsO	BD94_0248	BD94_2878	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S15p (S13e); Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.990
rplM	rpsP	BD94_0248	BD94_3366	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S16p; Belongs to the bacterial ribosomal protein bS16 family.	0.986
rpsB	rplM	BD94_0250	BD94_0248	SSU ribosomal protein S2p (SAe); Belongs to the universal ribosomal protein uS2 family.	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.995
rpsB	rpsI	BD94_0250	BD94_0249	SSU ribosomal protein S2p (SAe); Belongs to the universal ribosomal protein uS2 family.	SSU ribosomal protein S9p (S16e); Belongs to the universal ribosomal protein uS9 family.	0.998
rpsB	rpsO	BD94_0250	BD94_2878	SSU ribosomal protein S2p (SAe); Belongs to the universal ribosomal protein uS2 family.	SSU ribosomal protein S15p (S13e); Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.995
rpsB	rpsP	BD94_0250	BD94_3366	SSU ribosomal protein S2p (SAe); Belongs to the universal ribosomal protein uS2 family.	SSU ribosomal protein S16p; Belongs to the bacterial ribosomal protein bS16 family.	0.995
rpsI	rplM	BD94_0249	BD94_0248	SSU ribosomal protein S9p (S16e); Belongs to the universal ribosomal protein uS9 family.	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
rpsI	rpsB	BD94_0249	BD94_0250	SSU ribosomal protein S9p (S16e); Belongs to the universal ribosomal protein uS9 family.	SSU ribosomal protein S2p (SAe); Belongs to the universal ribosomal protein uS2 family.	0.998
rpsI	rpsO	BD94_0249	BD94_2878	SSU ribosomal protein S9p (S16e); Belongs to the universal ribosomal protein uS9 family.	SSU ribosomal protein S15p (S13e); Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.995
rpsI	rpsP	BD94_0249	BD94_3366	SSU ribosomal protein S9p (S16e); Belongs to the universal ribosomal protein uS9 family.	SSU ribosomal protein S16p; Belongs to the bacterial ribosomal protein bS16 family.	0.994
rpsO	rplM	BD94_2878	BD94_0248	SSU ribosomal protein S15p (S13e); Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.990
rpsO	rpsB	BD94_2878	BD94_0250	SSU ribosomal protein S15p (S13e); Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	SSU ribosomal protein S2p (SAe); Belongs to the universal ribosomal protein uS2 family.	0.995
rpsO	rpsI	BD94_2878	BD94_0249	SSU ribosomal protein S15p (S13e); Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	SSU ribosomal protein S9p (S16e); Belongs to the universal ribosomal protein uS9 family.	0.995
rpsO	rpsP	BD94_2878	BD94_3366	SSU ribosomal protein S15p (S13e); Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	SSU ribosomal protein S16p; Belongs to the bacterial ribosomal protein bS16 family.	0.994
rpsP	rplM	BD94_3366	BD94_0248	SSU ribosomal protein S16p; Belongs to the bacterial ribosomal protein bS16 family.	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.986
rpsP	rpsB	BD94_3366	BD94_0250	SSU ribosomal protein S16p; Belongs to the bacterial ribosomal protein bS16 family.	SSU ribosomal protein S2p (SAe); Belongs to the universal ribosomal protein uS2 family.	0.995
rpsP	rpsI	BD94_3366	BD94_0249	SSU ribosomal protein S16p; Belongs to the bacterial ribosomal protein bS16 family.	SSU ribosomal protein S9p (S16e); Belongs to the universal ribosomal protein uS9 family.	0.994
rpsP	rpsO	BD94_3366	BD94_2878	SSU ribosomal protein S16p; Belongs to the bacterial ribosomal protein bS16 family.	SSU ribosomal protein S15p (S13e); Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.994