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dnaG dnaG ybeY ybeY mnmG mnmG rnr rnr BD94_4063 BD94_4063 BD94_4057 BD94_4057 kptA kptA mnmA mnmA tadA tadA glyQS glyQS miaB miaB rnpA rnpA BD94_3926 BD94_3926 BD94_3919 BD94_3919 BD94_3903 BD94_3903 BD94_3880 BD94_3880 BD94_3869 BD94_3869 BD94_3853 BD94_3853 BD94_3805 BD94_3805 BD94_3804 BD94_3804 nusA nusA BD94_3742 BD94_3742 BD94_3691 BD94_3691 BD94_3687 BD94_3687 rpoA rpoA rpoC rpoC rpoB rpoB dtd dtd BD94_3385 BD94_3385 BD94_3377 BD94_3377 truA truA rimM rimM asnS asnS BD94_3360 BD94_3360 BD94_3358 BD94_3358 valS valS BD94_3349 BD94_3349 trmH trmH BD94_3154 BD94_3154 tsaD tsaD BD94_3128 BD94_3128 BD94_3078 BD94_3078 BD94_3056 BD94_3056 BD94_3017 BD94_3017 rbfA rbfA BD94_2970 BD94_2970 pnp pnp BD94_2860 BD94_2860 BD94_2779 BD94_2779 proS proS BD94_2732 BD94_2732 BD94_2594 BD94_2594 thrS thrS hisS hisS metG metG priA priA rlmN rlmN lysS lysS BD94_2323 BD94_2323 BD94_2319 BD94_2319 BD94_2318 BD94_2318 rsmG rsmG BD94_2266 BD94_2266 BD94_2243 BD94_2243 truB truB rsmA rsmA rnz rnz BD94_2200 BD94_2200 BD94_2192 BD94_2192 rlmH rlmH BD94_2051 BD94_2051 BD94_2045 BD94_2045 BD94_2028 BD94_2028 BD94_1832 BD94_1832 BD94_1608 BD94_1608 BD94_1491 BD94_1491 rny rny pheT pheT BD94_1309 BD94_1309 queG queG BD94_1281 BD94_1281 BD94_1250 BD94_1250 tyrS tyrS BD94_1232 BD94_1232 BD94_1226 BD94_1226 BD94_1225 BD94_1225 BD94_1193 BD94_1193 alaS alaS pheS pheS BD94_1061 BD94_1061 mnmE mnmE BD94_0991 BD94_0991 BD94_0951 BD94_0951 BD94_0929 BD94_0929 BD94_0913 BD94_0913 BD94_0870 BD94_0870 BD94_0830 BD94_0830 BD94_0787 BD94_0787 BD94_0781 BD94_0781 BD94_0761 BD94_0761 rimO rimO trmD trmD BD94_0624 BD94_0624 argS argS rnhB rnhB BD94_0546 BD94_0546 BD94_0436 BD94_0436 BD94_0422 BD94_0422 fmt fmt miaA miaA BD94_0371 BD94_0371 nusG nusG cysS cysS rnc rnc BD94_0320 BD94_0320 aspS aspS BD94_0304 BD94_0304 leuS leuS tilS tilS BD94_0275 BD94_0275 gltX gltX trmB trmB BD94_0220 BD94_0220 ileS ileS BD94_0195 BD94_0195 BD94_0187 BD94_0187 rho rho tgt tgt BD94_0147 BD94_0147 rsmH rsmH BD94_0053 BD94_0053 BD94_0048 BD94_0048 BD94_0030 BD94_0030 rsmI rsmI
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
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dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family. (639 aa)
ybeYMetal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (135 aa)
mnmGtRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. (620 aa)
rnr3'-to-5' exoribonuclease RNase R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. (691 aa)
BD94_4063Inactive metal-dependent proteasesilike protein, putative molecular chaperone. (225 aa)
BD94_4057RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (185 aa)
kptARNA:NAD 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. (180 aa)
mnmAtRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. (394 aa)
tadAtRNA-specific adenosine-34 deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (143 aa)
glyQSGlycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family. (513 aa)
miaBtRNA-i(6)A37 methylthiotransferase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. (478 aa)
rnpARibonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. (116 aa)
BD94_3926HesA/MoeB/ThiF family protein. (244 aa)
BD94_3919Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (107 aa)
BD94_3903RNA-2',3'-PO4:RNA-5'-OH ligase. (463 aa)
BD94_3880Seryl-tRNA synthetase. (421 aa)
BD94_3869RNA pseudouridylate synthase, group 1. (226 aa)
BD94_3853RNA polymerase sigma-54 factor RpoN; Belongs to the sigma-70 factor family. ECF subfamily. (183 aa)
BD94_3805Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family. (155 aa)
BD94_3804Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (525 aa)
nusATranscription termination protein NusA; Participates in both transcription termination and antitermination. (415 aa)
BD94_3742DNA primase. (279 aa)
BD94_3691Rhodanese-related sulfurtransferase; Belongs to the UPF0176 family. (454 aa)
BD94_3687Putative rRNA methylase. (254 aa)
rpoADNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (331 aa)
rpoCDNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1420 aa)
rpoBDNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1274 aa)
dtdD-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (149 aa)
BD94_3385Ribosomal large subunit pseudouridine synthase D 0; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (353 aa)
BD94_3377Ribosomal RNA small subunit methyltransferase D. (186 aa)
truAtRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (257 aa)
rimM16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. (180 aa)
asnSAsparaginyl-tRNA synthetase. (482 aa)
BD94_3360RNA polymerase sigma-54 factor RpoN. (487 aa)
BD94_3358RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (164 aa)
valSValyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. (871 aa)
BD94_3349HD domain protein. (215 aa)
trmHtRNA (Guanosine18-2'-O-) -methyltransferase; Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. (215 aa)
BD94_3154Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. (231 aa)
tsaDYgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. (338 aa)
BD94_312823S rRNA (guanosine-2'-O-) -methyltransferase rlmB; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. (252 aa)
BD94_3078Ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family. (240 aa)
BD94_3056Glutaminyl-tRNA synthetase. (556 aa)
BD94_3017Phenylalanyl-tRNA synthetase alpha chain; Belongs to the class-II aminoacyl-tRNA synthetase family. (344 aa)
rbfARibosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. (119 aa)
BD94_2970Ribonuclease. (158 aa)
pnpPolyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. (729 aa)
BD94_2860ATPase YjeE, predicted to have essential role in cell wall biosynthesis. (136 aa)
BD94_2779RNA polymerase sigma-70 factor; Belongs to the sigma-70 factor family. ECF subfamily. (158 aa)
proSProlyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). (491 aa)
BD94_2732Methyltransferase; Belongs to the methyltransferase superfamily. (394 aa)
BD94_2594RNA-binding protein. (93 aa)
thrSThreonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). (643 aa)
hisSHistidyl-tRNA synthetase. (449 aa)
metGMethionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. (677 aa)
priAHelicase PriA essential for oriC/DnaA-independent DNA replication; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (812 aa)
rlmNRibosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. (347 aa)
lysSLysyl-tRNA synthetase (class II); Belongs to the class-II aminoacyl-tRNA synthetase family. (567 aa)
BD94_2323RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (266 aa)
BD94_2319DNA primase. (317 aa)
BD94_2318Hypothetical protein. (409 aa)
rsmGrRNA small subunit methyltransferase, glucose inhibited division protein GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. (209 aa)
BD94_2266RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (288 aa)
BD94_2243SAM-dependent methyltransferase. (384 aa)
truBtRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. (235 aa)
rsmADimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. (255 aa)
rnzRibonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. (304 aa)
BD94_2200Tetrapyrrole (Corrin-Porphyrin) methylase family protein. (232 aa)
BD94_2192RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (138 aa)
rlmHLSU m3Psi1915 methyltransferase RlmH; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. (157 aa)
BD94_2051Sua5 YciO YrdC YwlC family protein; Belongs to the SUA5 family. (205 aa)
BD94_2045Putative peptidase. (224 aa)
BD94_2028Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. (328 aa)
BD94_1832RNA-binding protein. (86 aa)
BD94_1608DNA primase. (279 aa)
BD94_1491DNA primase. (139 aa)
rnyHydrolase (HAD superfamily); Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. (523 aa)
pheTPhenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. (799 aa)
BD94_1309Protein secretion chaperonin CsaA. (114 aa)
queGIron-sulfur cluster-binding protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family. (311 aa)
BD94_1281Cytoplasmic axial filament protein CafA and Ribonuclease G. (518 aa)
BD94_1250RNA polymerase sigma-70 factor; Belongs to the sigma-70 factor family. ECF subfamily. (186 aa)
tyrSTyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. (431 aa)
BD94_1232Putative ribonuclease. (155 aa)
BD94_1226Sua5 YciO YrdC YwlC family protein; Belongs to the SUA5 family. (182 aa)
BD94_1225tRNA nucleotidyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (474 aa)
BD94_1193MiaB family protein, possibly involved in tRNA or rRNA modification. (448 aa)
alaSAlanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. (867 aa)
pheSPhenylalanyl-tRNA synthetase alpha chain; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily. (336 aa)
BD94_1061TRNA and rRNA cytosine-C5-methylase. (401 aa)
mnmEGTPase and tRNA-U34 5-formylation enzyme TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (461 aa)
BD94_0991RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (166 aa)
BD94_0951Hypothetical protein. (110 aa)
BD94_0929Protein RtcB. (460 aa)
BD94_0913Hypothetical protein. (110 aa)
BD94_0870Sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (184 aa)
BD94_0830tRNA/rRNA methyltransferase. (242 aa)
BD94_0787Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. (136 aa)
BD94_0781RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (185 aa)
BD94_0761tRNA dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (329 aa)
rimORibosomal protein S12p Asp88 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. (434 aa)
trmDtRNA (Guanine37-N1) -methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. (200 aa)
BD94_0624Replicative DNA helicase. (379 aa)
argSArginyl-tRNA synthetase. (587 aa)
rnhBRibonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (192 aa)
BD94_0546Hypothetical protein. (149 aa)
BD94_0436RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (164 aa)
BD94_0422RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (179 aa)
fmtMethionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. (315 aa)
miaAtRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (311 aa)
BD94_0371Protein YicC. (285 aa)
nusGTranscription antitermination protein NusG; Participates in transcription elongation, termination and antitermination. (180 aa)
cysSCysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (487 aa)
rncRibonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. (256 aa)
BD94_0320RNA methyltransferase, TrmA family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (470 aa)
aspSAspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. (584 aa)
BD94_0304Transcription termination protein NusB. (301 aa)
leuSLeucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (939 aa)
tilStRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. (433 aa)
BD94_0275Putative O-methyltransferase; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC). (229 aa)
gltXGlutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. (503 aa)
trmBtRNA (guanine46-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (224 aa)
BD94_0220RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (169 aa)
ileSIsoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily. (1128 aa)
BD94_0195Tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (321 aa)
BD94_0187RNA polymerase sigma-70 factor, ECF subfamily. (196 aa)
rhoTranscription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. (577 aa)
tgttRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...] (378 aa)
BD94_0147TRNA/rRNA methyltransferase. (176 aa)
rsmHrRNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. (297 aa)
BD94_0053RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (177 aa)
BD94_0048tRNA-(ms[2]io[6]A)-hydroxylase. (192 aa)
BD94_0030RNA polymerase ECF-type sigma factor. (106 aa)
rsmIrRNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. (224 aa)
Your Current Organism:
Elizabethkingia anophelis
NCBI taxonomy Id: 1338011
Other names: E. anophelis NUHP1, Elizabethkingia anophelis NUHP1
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