11 items (Rhizopus microsporus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2G4SJC2	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (117 aa)
	A0A2G4SME8	4'-phosphopantetheinyl transferase. (255 aa)
	A0A2G4SMR2	Fatty acid synthase. (3861 aa)
	A0A2G4SQD1	FabD/lysophospholipase-like protein. (291 aa)
	A0A2G4SRN1	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (422 aa)
	A0A2G4ST56	Uncharacterized protein. (192 aa)
	A0A2G4STX5	Uncharacterized protein. (317 aa)
	A0A2G4SZ28	AMP-dependent synthetase and ligase. (523 aa)
	A0A2G4SZ80	Alpha-aminoadipate reductase Lys1p. (1384 aa)
	A0A2G4T6N5	Thioesterase family protein. (163 aa)
	A0A2G4T6S7	Acetyl-CoA carboxylase. (2216 aa)

Your Current Organism:

Rhizopus microsporus

NCBI taxonomy Id: 1340429
Other names: R. microsporus ATCC 52813, Rhizopus microsporus ATCC 52813

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2G4SJC2	A0A2G4SME8	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	4'-phosphopantetheinyl transferase.	0.914
A0A2G4SJC2	A0A2G4SMR2	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Fatty acid synthase.	0.527
A0A2G4SJC2	A0A2G4SQD1	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	FabD/lysophospholipase-like protein.	0.999
A0A2G4SJC2	A0A2G4SRN1	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.998
A0A2G4SJC2	A0A2G4ST56	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Uncharacterized protein.	0.843
A0A2G4SJC2	A0A2G4STX5	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Uncharacterized protein.	0.843
A0A2G4SJC2	A0A2G4SZ28	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	AMP-dependent synthetase and ligase.	0.845
A0A2G4SJC2	A0A2G4SZ80	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Alpha-aminoadipate reductase Lys1p.	0.937
A0A2G4SJC2	A0A2G4T6N5	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Thioesterase family protein.	0.933
A0A2G4SJC2	A0A2G4T6S7	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Acetyl-CoA carboxylase.	0.875
A0A2G4SME8	A0A2G4SJC2	4'-phosphopantetheinyl transferase.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.914
A0A2G4SME8	A0A2G4SQD1	4'-phosphopantetheinyl transferase.	FabD/lysophospholipase-like protein.	0.819
A0A2G4SME8	A0A2G4SRN1	4'-phosphopantetheinyl transferase.	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.926
A0A2G4SME8	A0A2G4ST56	4'-phosphopantetheinyl transferase.	Uncharacterized protein.	0.950
A0A2G4SME8	A0A2G4STX5	4'-phosphopantetheinyl transferase.	Uncharacterized protein.	0.966
A0A2G4SME8	A0A2G4SZ80	4'-phosphopantetheinyl transferase.	Alpha-aminoadipate reductase Lys1p.	0.839
A0A2G4SME8	A0A2G4T6N5	4'-phosphopantetheinyl transferase.	Thioesterase family protein.	0.822
A0A2G4SME8	A0A2G4T6S7	4'-phosphopantetheinyl transferase.	Acetyl-CoA carboxylase.	0.749
A0A2G4SMR2	A0A2G4SJC2	Fatty acid synthase.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.527
A0A2G4SMR2	A0A2G4SQD1	Fatty acid synthase.	FabD/lysophospholipase-like protein.	0.781