6 items (Rhizopus microsporus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2G4SGY4	ARM repeat-containing protein. (1476 aa)
	A0A2G4SHW8	APG6-domain-containing protein. (506 aa)
	A0A2G4SVI8	Phosphatidylinositol 3-kinase VPS34. (715 aa)
	A0A2G4T1R7	Pkinase-domain-containing protein. (684 aa)
	A0A2G4T533	Uncharacterized protein. (178 aa)
	A0A2G4TAG3	Uncharacterized protein. (558 aa)

Your Current Organism:

Rhizopus microsporus

NCBI taxonomy Id: 1340429
Other names: R. microsporus ATCC 52813, Rhizopus microsporus ATCC 52813

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2G4SGY4	A0A2G4SHW8	ARM repeat-containing protein.	APG6-domain-containing protein.	0.999
A0A2G4SGY4	A0A2G4SVI8	ARM repeat-containing protein.	Phosphatidylinositol 3-kinase VPS34.	0.999
A0A2G4SGY4	A0A2G4T1R7	ARM repeat-containing protein.	Pkinase-domain-containing protein.	0.993
A0A2G4SGY4	A0A2G4T533	ARM repeat-containing protein.	Uncharacterized protein.	0.869
A0A2G4SGY4	A0A2G4TAG3	ARM repeat-containing protein.	Uncharacterized protein.	0.998
A0A2G4SHW8	A0A2G4SGY4	APG6-domain-containing protein.	ARM repeat-containing protein.	0.999
A0A2G4SHW8	A0A2G4SVI8	APG6-domain-containing protein.	Phosphatidylinositol 3-kinase VPS34.	0.999
A0A2G4SHW8	A0A2G4T1R7	APG6-domain-containing protein.	Pkinase-domain-containing protein.	0.997
A0A2G4SHW8	A0A2G4T533	APG6-domain-containing protein.	Uncharacterized protein.	0.885
A0A2G4SHW8	A0A2G4TAG3	APG6-domain-containing protein.	Uncharacterized protein.	0.998
A0A2G4SVI8	A0A2G4SGY4	Phosphatidylinositol 3-kinase VPS34.	ARM repeat-containing protein.	0.999
A0A2G4SVI8	A0A2G4SHW8	Phosphatidylinositol 3-kinase VPS34.	APG6-domain-containing protein.	0.999
A0A2G4SVI8	A0A2G4T1R7	Phosphatidylinositol 3-kinase VPS34.	Pkinase-domain-containing protein.	0.993
A0A2G4SVI8	A0A2G4T533	Phosphatidylinositol 3-kinase VPS34.	Uncharacterized protein.	0.890
A0A2G4SVI8	A0A2G4TAG3	Phosphatidylinositol 3-kinase VPS34.	Uncharacterized protein.	0.999
A0A2G4T1R7	A0A2G4SGY4	Pkinase-domain-containing protein.	ARM repeat-containing protein.	0.993
A0A2G4T1R7	A0A2G4SHW8	Pkinase-domain-containing protein.	APG6-domain-containing protein.	0.997
A0A2G4T1R7	A0A2G4SVI8	Pkinase-domain-containing protein.	Phosphatidylinositol 3-kinase VPS34.	0.993
A0A2G4T1R7	A0A2G4T533	Pkinase-domain-containing protein.	Uncharacterized protein.	0.997
A0A2G4T1R7	A0A2G4TAG3	Pkinase-domain-containing protein.	Uncharacterized protein.	0.478