7 items (Rhizopus microsporus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2G4SFP0	Uncharacterized protein. (134 aa)
	A0A2G4SI88	Uncharacterized protein. (214 aa)
	A0A2G4SK48	Uncharacterized protein. (300 aa)
	A0A2G4SKP1	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (931 aa)
	A0A2G4SLN2	Acetyl-CoA synthetase-like protein. (634 aa)
	A0A2G4STV6	TPR-like protein. (615 aa)
	A0A2G4TA11	Uncharacterized protein. (403 aa)

Your Current Organism:

Rhizopus microsporus

NCBI taxonomy Id: 1340429
Other names: R. microsporus ATCC 52813, Rhizopus microsporus ATCC 52813

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2G4SFP0	A0A2G4SI88	Uncharacterized protein.	Uncharacterized protein.	0.774
A0A2G4SFP0	A0A2G4SKP1	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.604
A0A2G4SFP0	A0A2G4SLN2	Uncharacterized protein.	Acetyl-CoA synthetase-like protein.	0.924
A0A2G4SFP0	A0A2G4STV6	Uncharacterized protein.	TPR-like protein.	0.774
A0A2G4SFP0	A0A2G4TA11	Uncharacterized protein.	Uncharacterized protein.	0.923
A0A2G4SI88	A0A2G4SFP0	Uncharacterized protein.	Uncharacterized protein.	0.774
A0A2G4SI88	A0A2G4SK48	Uncharacterized protein.	Uncharacterized protein.	0.774
A0A2G4SI88	A0A2G4SKP1	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.731
A0A2G4SI88	A0A2G4SLN2	Uncharacterized protein.	Acetyl-CoA synthetase-like protein.	0.843
A0A2G4SI88	A0A2G4TA11	Uncharacterized protein.	Uncharacterized protein.	0.823
A0A2G4SK48	A0A2G4SI88	Uncharacterized protein.	Uncharacterized protein.	0.774
A0A2G4SK48	A0A2G4SKP1	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.593
A0A2G4SK48	A0A2G4SLN2	Uncharacterized protein.	Acetyl-CoA synthetase-like protein.	0.924
A0A2G4SK48	A0A2G4STV6	Uncharacterized protein.	TPR-like protein.	0.774
A0A2G4SK48	A0A2G4TA11	Uncharacterized protein.	Uncharacterized protein.	0.923
A0A2G4SKP1	A0A2G4SFP0	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.604
A0A2G4SKP1	A0A2G4SI88	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.731
A0A2G4SKP1	A0A2G4SK48	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.593
A0A2G4SKP1	A0A2G4STV6	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	TPR-like protein.	0.731
A0A2G4SLN2	A0A2G4SFP0	Acetyl-CoA synthetase-like protein.	Uncharacterized protein.	0.924