(26 nodes) Preribosome, large subunit precursor network (Rhizopus microsporus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	A0A2G4SNF5	FtsJ-domain-containing protein. (859 aa)
	A0A2G4T657	Uncharacterized protein. (389 aa)
	A0A2G4SSR0	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (242 aa)
	A0A2G4T6I6	Ebp2-domain-containing protein. (261 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (413 aa)
	A0A2G4ST23	Uncharacterized protein. (105 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (679 aa)
	A0A2G4T8I7	ARM repeat-containing protein. (552 aa)
	A0A2G4T8J8	Eukaryotic rRNA processing. (277 aa)
	A0A2G4SVQ9	Brix-domain-containing protein. (303 aa)
	A0A2G4SG49	Noc2-domain-containing protein. (638 aa)
	A0A2G4SIR4	CBF-domain-containing protein. (929 aa)
	A0A2G4SJ53	Brix-domain-containing protein. (283 aa)
	A0A2G4SJD1	Rsa3 domain-containing protein. (163 aa)
	A0A2G4SJE4	AAA-domain-containing protein. (868 aa)
	A0A2G4SJS3	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (212 aa)
	A0A2G4SN41	Las1-domain-containing protein. (426 aa)
	A0A2G4SWG1	Noc2-domain-containing protein. (636 aa)
	A0A2G4SYI4	C2H2-type domain-containing protein. (129 aa)
	A0A2G4SZ84	Protein MAK16; Belongs to the MAK16 family. (258 aa)
	A0A2G4SS56	Brix-domain-containing protein. (344 aa)
	A0A2G4SZA2	Rrp15p-domain-containing protein. (222 aa)
	A0A2G4T3V1	Uncharacterized protein. (248 aa)
	A0A2G4T4J1	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (180 aa)
	A0A2G4SSB7	Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (612 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (507 aa)

Your Current Organism:

Rhizopus microsporus

NCBI taxonomy Id: 1340429
Other names: R. microsporus ATCC 52813, Rhizopus microsporus ATCC 52813

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2G4SG49	A0A2G4SIR4	A0A2G4SG49	A0A2G4SIR4	Noc2-domain-containing protein.	CBF-domain-containing protein.	0.997
A0A2G4SG49	A0A2G4SJ53	A0A2G4SG49	A0A2G4SJ53	Noc2-domain-containing protein.	Brix-domain-containing protein.	0.996
A0A2G4SG49	A0A2G4SJE4	A0A2G4SG49	A0A2G4SJE4	Noc2-domain-containing protein.	AAA-domain-containing protein.	0.780
A0A2G4SG49	A0A2G4SJS3	A0A2G4SG49	A0A2G4SJS3	Noc2-domain-containing protein.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.995
A0A2G4SG49	A0A2G4SNF5	A0A2G4SG49	A0A2G4SNF5	Noc2-domain-containing protein.	FtsJ-domain-containing protein.	0.995
A0A2G4SG49	A0A2G4SS56	A0A2G4SG49	A0A2G4SS56	Noc2-domain-containing protein.	Brix-domain-containing protein.	0.975
A0A2G4SG49	A0A2G4SSB7	A0A2G4SG49	A0A2G4SSB7	Noc2-domain-containing protein.	Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family.	0.998
A0A2G4SG49	A0A2G4SSR0	A0A2G4SG49	A0A2G4SSR0	Noc2-domain-containing protein.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.951
A0A2G4SG49	A0A2G4ST23	A0A2G4SG49	A0A2G4ST23	Noc2-domain-containing protein.	Uncharacterized protein.	0.982
A0A2G4SG49	A0A2G4SVQ9	A0A2G4SG49	A0A2G4SVQ9	Noc2-domain-containing protein.	Brix-domain-containing protein.	0.990
A0A2G4SG49	A0A2G4SYI4	A0A2G4SG49	A0A2G4SYI4	Noc2-domain-containing protein.	C2H2-type domain-containing protein.	0.633
A0A2G4SG49	A0A2G4SZ84	A0A2G4SG49	A0A2G4SZ84	Noc2-domain-containing protein.	Protein MAK16; Belongs to the MAK16 family.	0.977
A0A2G4SG49	A0A2G4SZA2	A0A2G4SG49	A0A2G4SZA2	Noc2-domain-containing protein.	Rrp15p-domain-containing protein.	0.718
A0A2G4SG49	A0A2G4T3V1	A0A2G4SG49	A0A2G4T3V1	Noc2-domain-containing protein.	Uncharacterized protein.	0.976
A0A2G4SG49	A0A2G4T4J1	A0A2G4SG49	A0A2G4T4J1	Noc2-domain-containing protein.	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.989
A0A2G4SG49	A0A2G4T657	A0A2G4SG49	A0A2G4T657	Noc2-domain-containing protein.	Uncharacterized protein.	0.400
A0A2G4SG49	A0A2G4T6I6	A0A2G4SG49	A0A2G4T6I6	Noc2-domain-containing protein.	Ebp2-domain-containing protein.	0.930
A0A2G4SG49	A0A2G4T8I7	A0A2G4SG49	A0A2G4T8I7	Noc2-domain-containing protein.	ARM repeat-containing protein.	0.959
A0A2G4SG49	A0A2G4T8J8	A0A2G4SG49	A0A2G4T8J8	Noc2-domain-containing protein.	Eukaryotic rRNA processing.	0.996
A0A2G4SG49	ERB1	A0A2G4SG49	A0A2G4ST32	Noc2-domain-containing protein.	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.982