12 items (Rhizopus microsporus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2G4SY79	Uncharacterized protein. (318 aa)
	A0A2G4T3X9	Uncharacterized protein. (229 aa)
	A0A2G4T9L8	Uncharacterized protein. (323 aa)
	A0A2G4TA32	Uncharacterized protein. (415 aa)
	A0A2G4TAD0	Uncharacterized protein. (981 aa)
	A0A2G4SHN0	Uncharacterized protein. (701 aa)
	A0A2G4SJ00	Uncharacterized protein. (842 aa)
	A0A2G4SLZ8	KH domain-containing protein. (292 aa)
	A0A2G4SML3	Uncharacterized protein. (914 aa)
	A0A2G4SND2	KH domain-containing protein. (269 aa)
	A0A2G4SUJ1	Eukaryotic type KH-domain (KH-domain type I). (420 aa)
	A0A2G4SYP0	Uncharacterized protein. (300 aa)

Your Current Organism:

Rhizopus microsporus

NCBI taxonomy Id: 1340429
Other names: R. microsporus ATCC 52813, Rhizopus microsporus ATCC 52813

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2G4SLZ8	A0A2G4TA32	KH domain-containing protein.	Uncharacterized protein.	0.523
A0A2G4SML3	A0A2G4SUJ1	Uncharacterized protein.	Eukaryotic type KH-domain (KH-domain type I).	0.434
A0A2G4SML3	A0A2G4T9L8	Uncharacterized protein.	Uncharacterized protein.	0.434
A0A2G4SUJ1	A0A2G4SML3	Eukaryotic type KH-domain (KH-domain type I).	Uncharacterized protein.	0.434
A0A2G4SUJ1	A0A2G4SY79	Eukaryotic type KH-domain (KH-domain type I).	Uncharacterized protein.	0.425
A0A2G4SY79	A0A2G4SUJ1	Uncharacterized protein.	Eukaryotic type KH-domain (KH-domain type I).	0.425
A0A2G4SY79	A0A2G4SYP0	Uncharacterized protein.	Uncharacterized protein.	0.716
A0A2G4SY79	A0A2G4T3X9	Uncharacterized protein.	Uncharacterized protein.	0.620
A0A2G4SY79	A0A2G4T9L8	Uncharacterized protein.	Uncharacterized protein.	0.425
A0A2G4SY79	A0A2G4TA32	Uncharacterized protein.	Uncharacterized protein.	0.521
A0A2G4SYP0	A0A2G4SY79	Uncharacterized protein.	Uncharacterized protein.	0.716
A0A2G4SYP0	A0A2G4T3X9	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A2G4T3X9	A0A2G4SY79	Uncharacterized protein.	Uncharacterized protein.	0.620
A0A2G4T3X9	A0A2G4SYP0	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A2G4T9L8	A0A2G4SML3	Uncharacterized protein.	Uncharacterized protein.	0.434
A0A2G4T9L8	A0A2G4SY79	Uncharacterized protein.	Uncharacterized protein.	0.425
A0A2G4TA32	A0A2G4SLZ8	Uncharacterized protein.	KH domain-containing protein.	0.523
A0A2G4TA32	A0A2G4SY79	Uncharacterized protein.	Uncharacterized protein.	0.521