5 items (Rhizopus microsporus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2G4T222	SGS-domain-containing protein. (378 aa)
	A0A2G4SI51	TPR-like protein. (394 aa)
	A0A2G4T283	TPR_REGION domain-containing protein. (434 aa)
	A0A2G4T0W3	Peptidyl-prolyl cis-trans isomerase D. (364 aa)
	A0A2G4SMZ8	TPR-like protein. (92 aa)

Your Current Organism:

Rhizopus microsporus

NCBI taxonomy Id: 1340429
Other names: R. microsporus ATCC 52813, Rhizopus microsporus ATCC 52813

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2G4SI51	A0A2G4T222	TPR-like protein.	SGS-domain-containing protein.	0.699
A0A2G4SMZ8	A0A2G4T222	TPR-like protein.	SGS-domain-containing protein.	0.709
A0A2G4T0W3	A0A2G4T222	Peptidyl-prolyl cis-trans isomerase D.	SGS-domain-containing protein.	0.512
A0A2G4T222	A0A2G4SI51	SGS-domain-containing protein.	TPR-like protein.	0.699
A0A2G4T222	A0A2G4SMZ8	SGS-domain-containing protein.	TPR-like protein.	0.709
A0A2G4T222	A0A2G4T0W3	SGS-domain-containing protein.	Peptidyl-prolyl cis-trans isomerase D.	0.512
A0A2G4T222	A0A2G4T283	SGS-domain-containing protein.	TPR_REGION domain-containing protein.	0.707
A0A2G4T283	A0A2G4T222	TPR_REGION domain-containing protein.	SGS-domain-containing protein.	0.707