11 items (Rhizopus microsporus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2G4TAI1	Ubiquitin. (229 aa)
	A0A2G4T943	Uncharacterized protein. (269 aa)
	A0A2G4T4W4	Cell division control protein; Belongs to the CDC6/cdc18 family. (533 aa)
	A0A2G4T436	ARM repeat-containing protein. (469 aa)
	A0A2G4SXE8	KxDL domain-containing protein. (108 aa)
	A0A2G4SUY0	Ubiquitin-like domain-containing protein. (155 aa)
	A0A2G4STG9	Polyubiquitin 5. (228 aa)
	A0A2G4SLL8	Ubiquitin/40S ribosomal protein S27a fusion protein-like protein. (156 aa)
	A0A2G4SLC8	Uncharacterized protein. (262 aa)
	A0A2G4SKE7	RING/U-box. (109 aa)
	A0A2G4SHH3	Uncharacterized protein. (307 aa)

Your Current Organism:

Rhizopus microsporus

NCBI taxonomy Id: 1340429
Other names: R. microsporus ATCC 52813, Rhizopus microsporus ATCC 52813

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2G4SHH3	A0A2G4SLC8	Uncharacterized protein.	Uncharacterized protein.	0.666
A0A2G4SHH3	A0A2G4SLL8	Uncharacterized protein.	Ubiquitin/40S ribosomal protein S27a fusion protein-like protein.	0.655
A0A2G4SHH3	A0A2G4STG9	Uncharacterized protein.	Polyubiquitin 5.	0.670
A0A2G4SHH3	A0A2G4SUY0	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.655
A0A2G4SHH3	A0A2G4T436	Uncharacterized protein.	ARM repeat-containing protein.	0.750
A0A2G4SHH3	A0A2G4TAI1	Uncharacterized protein.	Ubiquitin.	0.670
A0A2G4SKE7	A0A2G4SLL8	RING/U-box.	Ubiquitin/40S ribosomal protein S27a fusion protein-like protein.	0.917
A0A2G4SKE7	A0A2G4STG9	RING/U-box.	Polyubiquitin 5.	0.925
A0A2G4SKE7	A0A2G4SUY0	RING/U-box.	Ubiquitin-like domain-containing protein.	0.917
A0A2G4SKE7	A0A2G4TAI1	RING/U-box.	Ubiquitin.	0.925
A0A2G4SLC8	A0A2G4SHH3	Uncharacterized protein.	Uncharacterized protein.	0.666
A0A2G4SLC8	A0A2G4SLL8	Uncharacterized protein.	Ubiquitin/40S ribosomal protein S27a fusion protein-like protein.	0.639
A0A2G4SLC8	A0A2G4STG9	Uncharacterized protein.	Polyubiquitin 5.	0.620
A0A2G4SLC8	A0A2G4SUY0	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.639
A0A2G4SLC8	A0A2G4T436	Uncharacterized protein.	ARM repeat-containing protein.	0.770
A0A2G4SLC8	A0A2G4TAI1	Uncharacterized protein.	Ubiquitin.	0.620
A0A2G4SLL8	A0A2G4SHH3	Ubiquitin/40S ribosomal protein S27a fusion protein-like protein.	Uncharacterized protein.	0.655
A0A2G4SLL8	A0A2G4SKE7	Ubiquitin/40S ribosomal protein S27a fusion protein-like protein.	RING/U-box.	0.917
A0A2G4SLL8	A0A2G4SLC8	Ubiquitin/40S ribosomal protein S27a fusion protein-like protein.	Uncharacterized protein.	0.639
A0A2G4SLL8	A0A2G4STG9	Ubiquitin/40S ribosomal protein S27a fusion protein-like protein.	Polyubiquitin 5.	0.924