16 items (Rhizopus microsporus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2G4T7E6	Uncharacterized protein. (1001 aa)
	A0A2G4TAI1	Ubiquitin. (229 aa)
	A0A2G4SHP3	Uncharacterized protein. (1378 aa)
	A0A2G4SK19	Leo1-like protein. (415 aa)
	A0A2G4SK69	Protein YIP. (194 aa)
	A0A2G4SLL8	Ubiquitin/40S ribosomal protein S27a fusion protein-like protein. (156 aa)
	A0A2G4SRG6	Uncharacterized protein. (972 aa)
	A0A2G4SSK5	Uncharacterized protein. (1027 aa)
	A0A2G4STG9	Polyubiquitin 5. (228 aa)
	A0A2G4SUY0	Ubiquitin-like domain-containing protein. (155 aa)
	A0A2G4SV32	Histone H2B; Belongs to the histone H2B family. (117 aa)
	A0A2G4SVP9	Uncharacterized protein. (1077 aa)
	A0A2G4SVZ3	Histone H2B; Belongs to the histone H2B family. (119 aa)
	A0A2G4SXE8	KxDL domain-containing protein. (108 aa)
	A0A2G4T1G4	Plus-3-domain-containing protein. (514 aa)
	A0A2G4T4H0	Uncharacterized protein. (648 aa)

Your Current Organism:

Rhizopus microsporus

NCBI taxonomy Id: 1340429
Other names: R. microsporus ATCC 52813, Rhizopus microsporus ATCC 52813

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2G4SHP3	A0A2G4SK19	Uncharacterized protein.	Leo1-like protein.	0.629
A0A2G4SHP3	A0A2G4SLL8	Uncharacterized protein.	Ubiquitin/40S ribosomal protein S27a fusion protein-like protein.	0.715
A0A2G4SHP3	A0A2G4SRG6	Uncharacterized protein.	Uncharacterized protein.	0.472
A0A2G4SHP3	A0A2G4SSK5	Uncharacterized protein.	Uncharacterized protein.	0.457
A0A2G4SHP3	A0A2G4STG9	Uncharacterized protein.	Polyubiquitin 5.	0.711
A0A2G4SHP3	A0A2G4SUY0	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.715
A0A2G4SHP3	A0A2G4SV32	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.580
A0A2G4SHP3	A0A2G4SVP9	Uncharacterized protein.	Uncharacterized protein.	0.471
A0A2G4SHP3	A0A2G4SVZ3	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.580
A0A2G4SHP3	A0A2G4T7E6	Uncharacterized protein.	Uncharacterized protein.	0.470
A0A2G4SHP3	A0A2G4TAI1	Uncharacterized protein.	Ubiquitin.	0.711
A0A2G4SK19	A0A2G4SHP3	Leo1-like protein.	Uncharacterized protein.	0.629
A0A2G4SK19	A0A2G4SLL8	Leo1-like protein.	Ubiquitin/40S ribosomal protein S27a fusion protein-like protein.	0.976
A0A2G4SK19	A0A2G4SRG6	Leo1-like protein.	Uncharacterized protein.	0.629
A0A2G4SK19	A0A2G4SSK5	Leo1-like protein.	Uncharacterized protein.	0.629
A0A2G4SK19	A0A2G4STG9	Leo1-like protein.	Polyubiquitin 5.	0.977
A0A2G4SK19	A0A2G4SUY0	Leo1-like protein.	Ubiquitin-like domain-containing protein.	0.976
A0A2G4SK19	A0A2G4SV32	Leo1-like protein.	Histone H2B; Belongs to the histone H2B family.	0.998
A0A2G4SK19	A0A2G4SVP9	Leo1-like protein.	Uncharacterized protein.	0.629
A0A2G4SK19	A0A2G4SVZ3	Leo1-like protein.	Histone H2B; Belongs to the histone H2B family.	0.998