23 items (Aspergillus welwitschiae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A3F3PPB8	WD40 repeat-like protein. (890 aa)
	A0A3F3PRV7	WD40-repeat-containing domain protein. (602 aa)
	A0A3F3PSB1	Anaphase promoting complex subunit 8. (682 aa)
	A0A3F3PSG2	TPR_REGION domain-containing protein. (763 aa)
	A0A3F3PUS8	Anaphase-promoting complex, cyclosome, subunit 4-domain-containing protein. (838 aa)
	A0A3F3PUX9	Galactose-binding domain-like protein. (499 aa)
	A0A3F3PX08	Anaphase-promoting complex subunit 5-domain-containing protein. (773 aa)
	A0A3F3PX61	Uncharacterized protein. (2091 aa)
	A0A3F3PXT6	Mitotic checkpoint regulator, MAD2B-interacting-domain-containing protein. (432 aa)
	A0A3F3PYP3	Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family. (181 aa)
	A0A3F3Q1T6	WD40-repeat-containing domain protein. (653 aa)
	A0A3F3Q2B6	DNA-binding protein. (226 aa)
	A0A3F3Q3Y7	Peptidase family C50-domain-containing protein. (2081 aa)
	A0A3F3Q8T5	TPR-like protein. (809 aa)
	A0A3F3Q9I8	Anaphase-promoting complex subunit 11. (90 aa)
	A0A3F3QAK0	Uncharacterized protein. (375 aa)
	A0A3F3QBJ6	CULLIN_2 domain-containing protein; Belongs to the cullin family. (1111 aa)
	A0A3F3QBL8	Mad3/BUB1 homology region 1-domain-containing protein. (1216 aa)
	A0A3F3QBT2	WD40-repeat-containing domain protein. (354 aa)
	A0A3F3QDC2	Negative regulator of the PHO system; Belongs to the protein kinase superfamily. (294 aa)
	A0A3F3QHV8	Mitotic checkpoint protein-domain-containing protein. (148 aa)
	A0A3F3QIB5	Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family. (450 aa)
	A0A3F3QIN6	Cyclin-like protein; Belongs to the cyclin family. (418 aa)

Your Current Organism:

Aspergillus welwitschiae

NCBI taxonomy Id: 1341132
Other names: A. welwitschiae, Aspergillus welwitschiae (Bres.) Henn., CBS 139.54, Ustilago welwitschiae

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A3F3PPB8	A0A3F3PSB1	WD40 repeat-like protein.	Anaphase promoting complex subunit 8.	0.883
A0A3F3PPB8	A0A3F3PSG2	WD40 repeat-like protein.	TPR_REGION domain-containing protein.	0.945
A0A3F3PPB8	A0A3F3PUS8	WD40 repeat-like protein.	Anaphase-promoting complex, cyclosome, subunit 4-domain-containing protein.	0.943
A0A3F3PPB8	A0A3F3PUX9	WD40 repeat-like protein.	Galactose-binding domain-like protein.	0.934
A0A3F3PPB8	A0A3F3PX08	WD40 repeat-like protein.	Anaphase-promoting complex subunit 5-domain-containing protein.	0.931
A0A3F3PPB8	A0A3F3PX61	WD40 repeat-like protein.	Uncharacterized protein.	0.940
A0A3F3PPB8	A0A3F3PXT6	WD40 repeat-like protein.	Mitotic checkpoint regulator, MAD2B-interacting-domain-containing protein.	0.883
A0A3F3PPB8	A0A3F3PYP3	WD40 repeat-like protein.	Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.	0.950
A0A3F3PPB8	A0A3F3Q2B6	WD40 repeat-like protein.	DNA-binding protein.	0.970
A0A3F3PPB8	A0A3F3Q3Y7	WD40 repeat-like protein.	Peptidase family C50-domain-containing protein.	0.849
A0A3F3PPB8	A0A3F3Q8T5	WD40 repeat-like protein.	TPR-like protein.	0.947
A0A3F3PPB8	A0A3F3Q9I8	WD40 repeat-like protein.	Anaphase-promoting complex subunit 11.	0.867
A0A3F3PPB8	A0A3F3QAK0	WD40 repeat-like protein.	Uncharacterized protein.	0.867
A0A3F3PPB8	A0A3F3QBJ6	WD40 repeat-like protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.933
A0A3F3PPB8	A0A3F3QBL8	WD40 repeat-like protein.	Mad3/BUB1 homology region 1-domain-containing protein.	0.965
A0A3F3PPB8	A0A3F3QBT2	WD40 repeat-like protein.	WD40-repeat-containing domain protein.	0.935
A0A3F3PPB8	A0A3F3QDC2	WD40 repeat-like protein.	Negative regulator of the PHO system; Belongs to the protein kinase superfamily.	0.910
A0A3F3PPB8	A0A3F3QHV8	WD40 repeat-like protein.	Mitotic checkpoint protein-domain-containing protein.	0.934
A0A3F3PPB8	A0A3F3QIB5	WD40 repeat-like protein.	Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.	0.868
A0A3F3PPB8	A0A3F3QIN6	WD40 repeat-like protein.	Cyclin-like protein; Belongs to the cyclin family.	0.930