(12 nodes) Mixed, incl. trans-Golgi network membrane, and Inositol phosphoceramide synthase complex network (Aspergillus welwitschiae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A3F3PNK5	DUF1753-domain-containing protein. (428 aa)
	A0A3F3PP76	Short-chain dehydrogenase/oxidoreductase. (268 aa)
	A0A3F3PRJ7	Uncharacterized protein. (207 aa)
	A0A3F3PV58	PQ loop repeat-domain-containing protein. (244 aa)
	A0A3F3Q0B5	NMT1 domain-containing protein. (327 aa)
	A0A3F3Q0R4	Uncharacterized protein. (266 aa)
	A0A3F3Q5T5	acidPPc domain-containing protein. (439 aa)
	A0A3F3QAB8	Dopey, N-terminal-domain-containing protein. (1853 aa)
	A0A3F3QAL6	Short-chain dehydrogenase. (252 aa)
	A0A3F3QBV8	Uncharacterized protein. (136 aa)
	A0A3F3QCY6	Uncharacterized protein. (1737 aa)
	A0A3F3QD40	Uncharacterized protein. (243 aa)

Your Current Organism:

Aspergillus welwitschiae

NCBI taxonomy Id: 1341132
Other names: A. welwitschiae, Aspergillus welwitschiae (Bres.) Henn., CBS 139.54, Ustilago welwitschiae

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A3F3PNK5	A0A3F3Q5T5	DUF1753-domain-containing protein.	acidPPc domain-containing protein.	0.570
A0A3F3Q0B5	A0A3F3Q0R4	NMT1 domain-containing protein.	Uncharacterized protein.	0.683
A0A3F3Q0R4	A0A3F3Q0B5	Uncharacterized protein.	NMT1 domain-containing protein.	0.683
A0A3F3Q0R4	A0A3F3Q5T5	Uncharacterized protein.	acidPPc domain-containing protein.	0.566
A0A3F3Q0R4	A0A3F3QAB8	Uncharacterized protein.	Dopey, N-terminal-domain-containing protein.	0.540
A0A3F3Q5T5	A0A3F3PNK5	acidPPc domain-containing protein.	DUF1753-domain-containing protein.	0.570
A0A3F3Q5T5	A0A3F3Q0R4	acidPPc domain-containing protein.	Uncharacterized protein.	0.566
A0A3F3Q5T5	A0A3F3QBV8	acidPPc domain-containing protein.	Uncharacterized protein.	0.566
A0A3F3Q5T5	A0A3F3QD40	acidPPc domain-containing protein.	Uncharacterized protein.	0.566
A0A3F3QAB8	A0A3F3Q0R4	Dopey, N-terminal-domain-containing protein.	Uncharacterized protein.	0.540
A0A3F3QAB8	A0A3F3QBV8	Dopey, N-terminal-domain-containing protein.	Uncharacterized protein.	0.540
A0A3F3QAB8	A0A3F3QCY6	Dopey, N-terminal-domain-containing protein.	Uncharacterized protein.	0.980
A0A3F3QAB8	A0A3F3QD40	Dopey, N-terminal-domain-containing protein.	Uncharacterized protein.	0.540
A0A3F3QBV8	A0A3F3Q5T5	Uncharacterized protein.	acidPPc domain-containing protein.	0.566
A0A3F3QBV8	A0A3F3QAB8	Uncharacterized protein.	Dopey, N-terminal-domain-containing protein.	0.540
A0A3F3QCY6	A0A3F3QAB8	Uncharacterized protein.	Dopey, N-terminal-domain-containing protein.	0.980
A0A3F3QD40	A0A3F3Q5T5	Uncharacterized protein.	acidPPc domain-containing protein.	0.566
A0A3F3QD40	A0A3F3QAB8	Uncharacterized protein.	Dopey, N-terminal-domain-containing protein.	0.540