28 items (Aspergillus welwitschiae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A3F3PGW8	Uncharacterized protein. (129 aa)
	A0A3F3PLB7	OTU domain-containing protein. (329 aa)
	A0A3F3PLM0	P-loop containing nucleoside triphosphate hydrolase protein. (751 aa)
	A0A3F3PMX9	Glucosidase II beta subunit-like protein-domain-containing protein. (507 aa)
	A0A3F3PNI8	UBX domain-containing protein. (516 aa)
	A0A3F3PR73	PUL domain-domain-containing protein. (783 aa)
	A0A3F3PRC7	P-loop containing nucleoside triphosphate hydrolase protein. (736 aa)
	A0A3F3PTU2	Uncharacterized protein. (897 aa)
	A0A3F3PVK4	AAA domain-containing protein. (1014 aa)
	A0A3F3PWP3	UBX domain-containing protein. (457 aa)
	A0A3F3PXU2	RING-type domain-containing protein. (714 aa)
	A0A3F3Q1X4	UBX domain protein. (514 aa)
	A0A3F3Q2G8	Uncharacterized protein. (833 aa)
	A0A3F3Q497	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family. (819 aa)
	A0A3F3Q4J1	GLUT4 regulating protein TUG-domain-containing protein. (508 aa)
	A0A3F3Q4P6	Ubiquitin elongating factor core-domain-containing protein. (1073 aa)
	A0A3F3Q584	Uncharacterized protein. (307 aa)
	A0A3F3Q7U8	Uncharacterized protein. (369 aa)
	A0A3F3Q814	DER1-domain-containing protein. (544 aa)
	A0A3F3QA12	P-loop containing nucleoside triphosphate hydrolase protein. (600 aa)
	A0A3F3QAU6	AAA domain-containing protein. (938 aa)
	A0A3F3QDC9	NPL4 family-domain-containing protein. (681 aa)
	A0A3F3QDJ3	Ubiquitin fusion degradation protein UFD1-domain-containing protein. (366 aa)
	A0A3F3QE58	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (246 aa)
	A0A3F3QHJ9	ANK_REP_REGION domain-containing protein. (1409 aa)
	A0A3F3QIK9	TGc domain-containing protein. (450 aa)
	A0A3F3QJ91	P-loop containing nucleoside triphosphate hydrolase protein. (662 aa)
	A0A3F3QJA6	Uncharacterized protein. (996 aa)

Your Current Organism:

Aspergillus welwitschiae

NCBI taxonomy Id: 1341132
Other names: A. welwitschiae, Aspergillus welwitschiae (Bres.) Henn., CBS 139.54, Ustilago welwitschiae

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A3F3PGW8	A0A3F3PLB7	Uncharacterized protein.	OTU domain-containing protein.	0.830
A0A3F3PGW8	A0A3F3PMX9	Uncharacterized protein.	Glucosidase II beta subunit-like protein-domain-containing protein.	0.806
A0A3F3PGW8	A0A3F3PNI8	Uncharacterized protein.	UBX domain-containing protein.	0.825
A0A3F3PGW8	A0A3F3PR73	Uncharacterized protein.	PUL domain-domain-containing protein.	0.650
A0A3F3PGW8	A0A3F3PTU2	Uncharacterized protein.	Uncharacterized protein.	0.614
A0A3F3PGW8	A0A3F3PWP3	Uncharacterized protein.	UBX domain-containing protein.	0.783
A0A3F3PGW8	A0A3F3PXU2	Uncharacterized protein.	RING-type domain-containing protein.	0.804
A0A3F3PGW8	A0A3F3Q1X4	Uncharacterized protein.	UBX domain protein.	0.789
A0A3F3PGW8	A0A3F3Q2G8	Uncharacterized protein.	Uncharacterized protein.	0.614
A0A3F3PGW8	A0A3F3Q4J1	Uncharacterized protein.	GLUT4 regulating protein TUG-domain-containing protein.	0.788
A0A3F3PGW8	A0A3F3Q4P6	Uncharacterized protein.	Ubiquitin elongating factor core-domain-containing protein.	0.643
A0A3F3PGW8	A0A3F3Q584	Uncharacterized protein.	Uncharacterized protein.	0.772
A0A3F3PGW8	A0A3F3Q7U8	Uncharacterized protein.	Uncharacterized protein.	0.748
A0A3F3PGW8	A0A3F3Q814	Uncharacterized protein.	DER1-domain-containing protein.	0.766
A0A3F3PGW8	A0A3F3QDC9	Uncharacterized protein.	NPL4 family-domain-containing protein.	0.836
A0A3F3PGW8	A0A3F3QDJ3	Uncharacterized protein.	Ubiquitin fusion degradation protein UFD1-domain-containing protein.	0.836
A0A3F3PGW8	A0A3F3QE58	Uncharacterized protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.766
A0A3F3PGW8	A0A3F3QHJ9	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.576
A0A3F3PGW8	A0A3F3QIK9	Uncharacterized protein.	TGc domain-containing protein.	0.750
A0A3F3PGW8	A0A3F3QJA6	Uncharacterized protein.	Uncharacterized protein.	0.546