STRINGSTRING
A0A3F3PKL1 A0A3F3PKL1 A0A3F3PL95 A0A3F3PL95 A0A3F3PLE2 A0A3F3PLE2 A0A3F3PLU3 A0A3F3PLU3 A0A3F3PLU4 A0A3F3PLU4 A0A3F3PNC7 A0A3F3PNC7 A0A3F3PRE9 A0A3F3PRE9 A0A3F3PTB2 A0A3F3PTB2 A0A3F3PUD9 A0A3F3PUD9 A0A3F3PWY5 A0A3F3PWY5 A0A3F3PX03 A0A3F3PX03 A0A3F3PXV1 A0A3F3PXV1 A0A3F3PXZ9 A0A3F3PXZ9 A0A3F3PZL3 A0A3F3PZL3 A0A3F3Q084 A0A3F3Q084 A0A3F3Q0H0 A0A3F3Q0H0 A0A3F3Q0H2 A0A3F3Q0H2 A0A3F3Q0P4 A0A3F3Q0P4 A0A3F3Q0V5 A0A3F3Q0V5 A0A3F3Q2H0 A0A3F3Q2H0 A0A3F3Q2H7 A0A3F3Q2H7 A0A3F3Q5P8 A0A3F3Q5P8 A0A3F3Q6P2 A0A3F3Q6P2 A0A3F3Q8I9 A0A3F3Q8I9 A0A3F3Q8J2 A0A3F3Q8J2 A0A3F3QAD5 A0A3F3QAD5 A0A3F3QD83 A0A3F3QD83 A0A3F3QDX7 A0A3F3QDX7 A0A3F3QEV3 A0A3F3QEV3 A0A3F3QHB8 A0A3F3QHB8 A0A3F3QJB6 A0A3F3QJB6 A0A3F3QL33 A0A3F3QL33 A0A3F3QLI4 A0A3F3QLI4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A3F3PKL1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (709 aa)
A0A3F3PL95RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (478 aa)
A0A3F3PLE2ATP-dependent DNA helicase-like protein. (1005 aa)
A0A3F3PLU3Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (111 aa)
A0A3F3PLU4Uncharacterized protein. (386 aa)
A0A3F3PNC7Kinase-like domain-containing protein; Belongs to the protein kinase superfamily. (406 aa)
A0A3F3PRE9Transcription initiation factor TFIID subunit 13. (287 aa)
A0A3F3PTB2Transcription initiation factor IIF, beta subunit-domain-containing protein. (383 aa)
A0A3F3PUD9Cyclin-like protein. (351 aa)
A0A3F3PWY5Transcription initiation factor TFIID subunit A-domain-containing protein. (609 aa)
A0A3F3PX03Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (292 aa)
A0A3F3PXV1Uncharacterized protein. (1272 aa)
A0A3F3PXZ9Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (273 aa)
A0A3F3PZL3TFIIH subunit TTDA/Tfb5. (72 aa)
A0A3F3Q084General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (457 aa)
A0A3F3Q0H0HTAFII28-like protein conserved region-domain-containing protein. (343 aa)
A0A3F3Q0H2TAF domain-containing protein. (447 aa)
A0A3F3Q0P4DNA repair helicase rad25. (818 aa)
A0A3F3Q0V5BTP domain-containing protein. (883 aa)
A0A3F3Q2H0Transcription factor IIA, alpha/beta subunit. (289 aa)
A0A3F3Q2H7Transcription initiation factor IID, 31kD subunit-domain-containing protein. (314 aa)
A0A3F3Q5P8Transcription factor TFIID-domain-containing protein. (262 aa)
A0A3F3Q6P2Transcription factor TFIIH complex subunit. (379 aa)
A0A3F3Q8I9Cyclin Ccl1; Belongs to the cyclin family. (427 aa)
A0A3F3Q8J2TFIIE alpha subunit-domain-containing protein. (453 aa)
A0A3F3QAD5DUF3591 domain-containing protein. (962 aa)
A0A3F3QD83WD40 repeat-like protein. (745 aa)
A0A3F3QDX7PHD-type domain-containing protein. (848 aa)
A0A3F3QEV3TAFII55 protein conserved region-domain-containing protein. (493 aa)
A0A3F3QHB8Helicase ATP-binding domain-containing protein. (801 aa)
A0A3F3QJB6Transcription factor IIIc-like protein. (573 aa)
A0A3F3QL33Uncharacterized protein. (629 aa)
A0A3F3QLI4CDK-activating kinase assembly factor MAT1-domain-containing protein. (384 aa)
Your Current Organism:
Aspergillus welwitschiae
NCBI taxonomy Id: 1341132
Other names: A. welwitschiae, Aspergillus welwitschiae (Bres.) Henn., CBS 139.54, Ustilago welwitschiae
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