10 items (Aspergillus welwitschiae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A3F3PKJ6	Bystin-domain-containing protein. (493 aa)
	A0A3F3PUP5	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (294 aa)
	A0A3F3PV78	Kinase-like domain-containing protein. (387 aa)
	A0A3F3PYN8	S-adenosyl-L-methionine-dependent methyltransferase. (279 aa)
	A0A3F3PYP2	Eukaryotic type KH-domain (KH-domain type I). (259 aa)
	A0A3F3PZP9	Bms1-type G domain-containing protein. (803 aa)
	A0A3F3Q0B6	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (433 aa)
	A0A3F3Q753	Rio2, N-terminal-domain-containing protein. (402 aa)
	A0A3F3Q7V1	Low temperature viability protein. (493 aa)
	A0A3F3QJJ0	Kinase-like domain-containing protein; Belongs to the protein kinase superfamily. (401 aa)

Your Current Organism:

Aspergillus welwitschiae

NCBI taxonomy Id: 1341132
Other names: A. welwitschiae, Aspergillus welwitschiae (Bres.) Henn., CBS 139.54, Ustilago welwitschiae

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A3F3PKJ6	A0A3F3PUP5	Bystin-domain-containing protein.	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.985
A0A3F3PKJ6	A0A3F3PV78	Bystin-domain-containing protein.	Kinase-like domain-containing protein.	0.871
A0A3F3PKJ6	A0A3F3PYN8	Bystin-domain-containing protein.	S-adenosyl-L-methionine-dependent methyltransferase.	0.991
A0A3F3PKJ6	A0A3F3PYP2	Bystin-domain-containing protein.	Eukaryotic type KH-domain (KH-domain type I).	0.998
A0A3F3PKJ6	A0A3F3PZP9	Bystin-domain-containing protein.	Bms1-type G domain-containing protein.	0.999
A0A3F3PKJ6	A0A3F3Q0B6	Bystin-domain-containing protein.	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.	0.999
A0A3F3PKJ6	A0A3F3Q753	Bystin-domain-containing protein.	Rio2, N-terminal-domain-containing protein.	0.994
A0A3F3PKJ6	A0A3F3Q7V1	Bystin-domain-containing protein.	Low temperature viability protein.	0.999
A0A3F3PKJ6	A0A3F3QJJ0	Bystin-domain-containing protein.	Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.	0.901
A0A3F3PUP5	A0A3F3PKJ6	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	Bystin-domain-containing protein.	0.985
A0A3F3PUP5	A0A3F3PYN8	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	S-adenosyl-L-methionine-dependent methyltransferase.	0.884
A0A3F3PUP5	A0A3F3PYP2	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	Eukaryotic type KH-domain (KH-domain type I).	0.865
A0A3F3PUP5	A0A3F3PZP9	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	Bms1-type G domain-containing protein.	0.985
A0A3F3PUP5	A0A3F3Q0B6	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.	0.921
A0A3F3PUP5	A0A3F3Q753	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	Rio2, N-terminal-domain-containing protein.	0.940
A0A3F3PUP5	A0A3F3Q7V1	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	Low temperature viability protein.	0.959
A0A3F3PUP5	A0A3F3QJJ0	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.	0.437
A0A3F3PV78	A0A3F3PKJ6	Kinase-like domain-containing protein.	Bystin-domain-containing protein.	0.871
A0A3F3PV78	A0A3F3PYN8	Kinase-like domain-containing protein.	S-adenosyl-L-methionine-dependent methyltransferase.	0.668
A0A3F3PV78	A0A3F3PYP2	Kinase-like domain-containing protein.	Eukaryotic type KH-domain (KH-domain type I).	0.732