STRINGSTRING
A0A3F3PU35 A0A3F3PU35 A0A3F3PU58 A0A3F3PU58 A0A3F3Q225 A0A3F3Q225 A0A3F3Q3J2 A0A3F3Q3J2 A0A3F3Q8U5 A0A3F3Q8U5 A0A3F3QAC8 A0A3F3QAC8 A0A3F3QDK3 A0A3F3QDK3 A0A3F3QG88 A0A3F3QG88
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A3F3PU35Concanavalin A-like lectin/glucanase domain-containing protein. (396 aa)
A0A3F3PU58KH domain-containing protein. (283 aa)
A0A3F3Q225Concanavalin A-like lectin/glucanase domain-containing protein. (486 aa)
A0A3F3Q3J2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (571 aa)
A0A3F3Q8U5Nuclear cap-binding protein subunit 2. (176 aa)
A0A3F3QAC8Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (121 aa)
A0A3F3QDK3U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (414 aa)
A0A3F3QG88U1 small nuclear ribonucleo protein of 70kDa MW N terminal-domain-containing protein. (389 aa)
Your Current Organism:
Aspergillus welwitschiae
NCBI taxonomy Id: 1341132
Other names: A. welwitschiae, Aspergillus welwitschiae (Bres.) Henn., CBS 139.54, Ustilago welwitschiae
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