11 items (Aspergillus welwitschiae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A3F3PNC9	RNA polymerase, subunit omega/K/RPB6. (160 aa)
	A0A3F3PNE2	DNA-directed RNA polymerase. (157 aa)
	A0A3F3PTK6	DNA-directed RNA polymerase subunit E. (169 aa)
	A0A3F3PZ59	DNA-directed RNA polymerase. (338 aa)
	A0A3F3Q1A1	Uncharacterized protein. (110 aa)
	A0A3F3Q211	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1747 aa)
	A0A3F3Q2E3	RNA polymerase. (235 aa)
	A0A3F3Q8I4	RPOL9 domain-containing protein. (122 aa)
	A0A3F3Q8V7	DNA-directed RNA polymerase, subunit N/Rpb10. (74 aa)
	A0A3F3Q9D9	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1829 aa)
	A0A3F3QEJ5	DNA directed RNA polymerase. (74 aa)

Your Current Organism:

Aspergillus welwitschiae

NCBI taxonomy Id: 1341132
Other names: A. welwitschiae, Aspergillus welwitschiae (Bres.) Henn., CBS 139.54, Ustilago welwitschiae

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A3F3PNC9	A0A3F3PNE2	RNA polymerase, subunit omega/K/RPB6.	DNA-directed RNA polymerase.	0.999
A0A3F3PNC9	A0A3F3PTK6	RNA polymerase, subunit omega/K/RPB6.	DNA-directed RNA polymerase subunit E.	0.998
A0A3F3PNC9	A0A3F3PZ59	RNA polymerase, subunit omega/K/RPB6.	DNA-directed RNA polymerase.	0.999
A0A3F3PNC9	A0A3F3Q1A1	RNA polymerase, subunit omega/K/RPB6.	Uncharacterized protein.	0.998
A0A3F3PNC9	A0A3F3Q211	RNA polymerase, subunit omega/K/RPB6.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.997
A0A3F3PNC9	A0A3F3Q2E3	RNA polymerase, subunit omega/K/RPB6.	RNA polymerase.	0.999
A0A3F3PNC9	A0A3F3Q8I4	RNA polymerase, subunit omega/K/RPB6.	RPOL9 domain-containing protein.	0.999
A0A3F3PNC9	A0A3F3Q8V7	RNA polymerase, subunit omega/K/RPB6.	DNA-directed RNA polymerase, subunit N/Rpb10.	0.999
A0A3F3PNC9	A0A3F3Q9D9	RNA polymerase, subunit omega/K/RPB6.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
A0A3F3PNC9	A0A3F3QEJ5	RNA polymerase, subunit omega/K/RPB6.	DNA directed RNA polymerase.	0.998
A0A3F3PNE2	A0A3F3PNC9	DNA-directed RNA polymerase.	RNA polymerase, subunit omega/K/RPB6.	0.999
A0A3F3PNE2	A0A3F3PTK6	DNA-directed RNA polymerase.	DNA-directed RNA polymerase subunit E.	0.998
A0A3F3PNE2	A0A3F3PZ59	DNA-directed RNA polymerase.	DNA-directed RNA polymerase.	0.998
A0A3F3PNE2	A0A3F3Q1A1	DNA-directed RNA polymerase.	Uncharacterized protein.	0.998
A0A3F3PNE2	A0A3F3Q211	DNA-directed RNA polymerase.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.997
A0A3F3PNE2	A0A3F3Q2E3	DNA-directed RNA polymerase.	RNA polymerase.	0.998
A0A3F3PNE2	A0A3F3Q8I4	DNA-directed RNA polymerase.	RPOL9 domain-containing protein.	0.999
A0A3F3PNE2	A0A3F3Q8V7	DNA-directed RNA polymerase.	DNA-directed RNA polymerase, subunit N/Rpb10.	0.999
A0A3F3PNE2	A0A3F3Q9D9	DNA-directed RNA polymerase.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.997
A0A3F3PNE2	A0A3F3QEJ5	DNA-directed RNA polymerase.	DNA directed RNA polymerase.	0.998