STRINGSTRING
A0A3F3PLU3 A0A3F3PLU3 A0A3F3PL50 A0A3F3PL50 A0A3F3PKR6 A0A3F3PKR6 A0A3F3PKL1 A0A3F3PKL1 A0A3F3PGZ8 A0A3F3PGZ8 A0A3F3PNC9 A0A3F3PNC9 A0A3F3QL33 A0A3F3QL33 A0A3F3QJY0 A0A3F3QJY0 A0A3F3QJF1 A0A3F3QJF1 A0A3F3QJB6 A0A3F3QJB6 BDQ94DRAFT_421 BDQ94DRAFT_421 A0A3F3QHB8 A0A3F3QHB8 A0A3F3QGT8 A0A3F3QGT8 A0A3F3QGK6 A0A3F3QGK6 A0A3F3QFY2 A0A3F3QFY2 A0A3F3QEV3 A0A3F3QEV3 A0A3F3QEJ5 A0A3F3QEJ5 A0A3F3QE95 A0A3F3QE95 A0A3F3QE91 A0A3F3QE91 A0A3F3QDX7 A0A3F3QDX7 A0A3F3QDJ4 A0A3F3QDJ4 A0A3F3QDD0 A0A3F3QDD0 A0A3F3QD83 A0A3F3QD83 A0A3F3QCU3 A0A3F3QCU3 A0A3F3QCM7 A0A3F3QCM7 A0A3F3QCG5 A0A3F3QCG5 A0A3F3QAD5 A0A3F3QAD5 A0A3F3Q9D9 A0A3F3Q9D9 A0A3F3Q943 A0A3F3Q943 A0A3F3Q8V7 A0A3F3Q8V7 A0A3F3Q8V0 A0A3F3Q8V0 A0A3F3Q8R3 A0A3F3Q8R3 A0A3F3Q8J2 A0A3F3Q8J2 A0A3F3Q8I9 A0A3F3Q8I9 A0A3F3Q8I4 A0A3F3Q8I4 A0A3F3Q7Y4 A0A3F3Q7Y4 A0A3F3Q7T0 A0A3F3Q7T0 A0A3F3Q7E1 A0A3F3Q7E1 A0A3F3Q6P2 A0A3F3Q6P2 A0A3F3Q6N6 A0A3F3Q6N6 A0A3F3Q669 A0A3F3Q669 A0A3F3Q5P8 A0A3F3Q5P8 A0A3F3Q4W3 A0A3F3Q4W3 A0A3F3Q3X1 A0A3F3Q3X1 A0A3F3Q2I7 A0A3F3Q2I7 A0A3F3Q2H7 A0A3F3Q2H7 A0A3F3Q2H0 A0A3F3Q2H0 A0A3F3Q2E3 A0A3F3Q2E3 A0A3F3Q211 A0A3F3Q211 A0A3F3Q202 A0A3F3Q202 A0A3F3Q1S5 A0A3F3Q1S5 A0A3F3Q1A1 A0A3F3Q1A1 A0A3F3Q0V5 A0A3F3Q0V5 A0A3F3Q0P4 A0A3F3Q0P4 A0A3F3Q0N8 A0A3F3Q0N8 A0A3F3Q0H2 A0A3F3Q0H2 A0A3F3Q0H0 A0A3F3Q0H0 A0A3F3Q0A0 A0A3F3Q0A0 A0A3F3Q084 A0A3F3Q084 A0A3F3Q073 A0A3F3Q073 A0A3F3PZL3 A0A3F3PZL3 A0A3F3PZI9 A0A3F3PZI9 A0A3F3PZ59 A0A3F3PZ59 A0A3F3PZ05 A0A3F3PZ05 A0A3F3PYL4 A0A3F3PYL4 A0A3F3PYG1 A0A3F3PYG1 A0A3F3PY39 A0A3F3PY39 A0A3F3PXZ9 A0A3F3PXZ9 A0A3F3PXV1 A0A3F3PXV1 A0A3F3PXF4 A0A3F3PXF4 A0A3F3PX54 A0A3F3PX54 A0A3F3PX03 A0A3F3PX03 A0A3F3PWY5 A0A3F3PWY5 A0A3F3PUM4 A0A3F3PUM4 A0A3F3PUD9 A0A3F3PUD9 A0A3F3PTM9 A0A3F3PTM9 A0A3F3PTK6 A0A3F3PTK6 A0A3F3PTB2 A0A3F3PTB2 A0A3F3PSY3 A0A3F3PSY3 A0A3F3PS06 A0A3F3PS06 A0A3F3PRR7 A0A3F3PRR7 A0A3F3PRE9 A0A3F3PRE9 A0A3F3PNE2 A0A3F3PNE2 A0A3F3PNC7 A0A3F3PNC7 A0A3F3PNB0 A0A3F3PNB0 A0A3F3PMU6 A0A3F3PMU6 A0A3F3PLU4 A0A3F3PLU4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A3F3PLU3Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (111 aa)
A0A3F3PL50RSC complex subunit. (890 aa)
A0A3F3PKR6Uncharacterized protein. (772 aa)
A0A3F3PKL1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (709 aa)
A0A3F3PGZ8Uncharacterized protein. (416 aa)
A0A3F3PNC9RNA polymerase, subunit omega/K/RPB6. (160 aa)
A0A3F3QL33Uncharacterized protein. (629 aa)
A0A3F3QJY03' exoribonuclease family, domain 1-domain-containing protein. (269 aa)
A0A3F3QJF1RNA polymerase II transcription elongation factor Rtf1p. (606 aa)
A0A3F3QJB6Transcription factor IIIc-like protein. (573 aa)
BDQ94DRAFT_421mRNA cleavage factor complex component Pcf11. (658 aa)
A0A3F3QHB8Helicase ATP-binding domain-containing protein. (801 aa)
A0A3F3QGT8SAGA-like transcriptional regulatory complex subunit Spt3. (389 aa)
A0A3F3QGK6Uncharacterized protein. (624 aa)
A0A3F3QFY2BHLH domain-containing protein. (316 aa)
A0A3F3QEV3TAFII55 protein conserved region-domain-containing protein. (493 aa)
A0A3F3QEJ5DNA directed RNA polymerase. (74 aa)
A0A3F3QE95Uncharacterized protein. (259 aa)
A0A3F3QE91BTP domain-containing protein. (215 aa)
A0A3F3QDX7PHD-type domain-containing protein. (848 aa)
A0A3F3QDJ4ISWI chromatin-remodeling complex ATPase ISW2. (1121 aa)
A0A3F3QDD0RAI1 like PD-XK nuclease-domain-containing protein. (368 aa)
A0A3F3QD83WD40 repeat-like protein. (745 aa)
A0A3F3QCU3Fungal-specific transcription factor domain-domain-containing protein. (623 aa)
A0A3F3QCM7Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (772 aa)
A0A3F3QCG5Beta-lactamase-like protein. (926 aa)
A0A3F3QAD5DUF3591 domain-containing protein. (962 aa)
A0A3F3Q9D9DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1829 aa)
A0A3F3Q943Kinase-like domain-containing protein. (553 aa)
A0A3F3Q8V7DNA-directed RNA polymerase, subunit N/Rpb10. (74 aa)
A0A3F3Q8V0RNA polymerase II transcription factor SIII subunit A-domain-containing protein. (359 aa)
A0A3F3Q8R3Tho complex subunit 7-domain-containing protein. (335 aa)
A0A3F3Q8J2TFIIE alpha subunit-domain-containing protein. (453 aa)
A0A3F3Q8I9Cyclin Ccl1; Belongs to the cyclin family. (427 aa)
A0A3F3Q8I4RPOL9 domain-containing protein. (122 aa)
A0A3F3Q7Y4Putative DNA helicase ino80. (1697 aa)
A0A3F3Q7T0Uncharacterized protein. (1615 aa)
A0A3F3Q7E1Transcription factor/nuclear export subunit protein 2-domain-containing protein. (2435 aa)
A0A3F3Q6P2Transcription factor TFIIH complex subunit. (379 aa)
A0A3F3Q6N6Uncharacterized protein. (348 aa)
A0A3F3Q669RRM domain-containing protein. (918 aa)
A0A3F3Q5P8Transcription factor TFIID-domain-containing protein. (262 aa)
A0A3F3Q4W3AAA_12 domain-containing protein. (262 aa)
A0A3F3Q3X1Uncharacterized protein. (576 aa)
A0A3F3Q2I7Histone-fold-containing protein. (142 aa)
A0A3F3Q2H7Transcription initiation factor IID, 31kD subunit-domain-containing protein. (314 aa)
A0A3F3Q2H0Transcription factor IIA, alpha/beta subunit. (289 aa)
A0A3F3Q2E3RNA polymerase. (235 aa)
A0A3F3Q211DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1747 aa)
A0A3F3Q202HMG box domain-containing protein. (303 aa)
A0A3F3Q1S5PCI domain-containing protein. (453 aa)
A0A3F3Q1A1Uncharacterized protein. (110 aa)
A0A3F3Q0V5BTP domain-containing protein. (883 aa)
A0A3F3Q0P4DNA repair helicase rad25. (818 aa)
A0A3F3Q0N8Protein kinase domain-containing protein. (1067 aa)
A0A3F3Q0H2TAF domain-containing protein. (447 aa)
A0A3F3Q0H0HTAFII28-like protein conserved region-domain-containing protein. (343 aa)
A0A3F3Q0A0Uncharacterized protein. (739 aa)
A0A3F3Q084General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (457 aa)
A0A3F3Q073Ribonuclease III domain-containing protein. (359 aa)
A0A3F3PZL3TFIIH subunit TTDA/Tfb5. (72 aa)
A0A3F3PZI9P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family. (559 aa)
A0A3F3PZ59DNA-directed RNA polymerase. (338 aa)
A0A3F3PZ05Histone-fold-containing protein. (293 aa)
A0A3F3PYL4Rtt106 domain-containing protein. (455 aa)
A0A3F3PYG1Chromatin remodelling complex Rsc7/Swp82 subunit-domain-containing protein. (574 aa)
A0A3F3PY39RNA pol II accessory factor, Cdc73 family-domain-containing protein. (476 aa)
A0A3F3PXZ9Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (273 aa)
A0A3F3PXV1Uncharacterized protein. (1272 aa)
A0A3F3PXF4RPAP1-like protein. (480 aa)
A0A3F3PX54Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1415 aa)
A0A3F3PX03Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (292 aa)
A0A3F3PWY5Transcription initiation factor TFIID subunit A-domain-containing protein. (609 aa)
A0A3F3PUM4Uncharacterized protein. (224 aa)
A0A3F3PUD9Cyclin-like protein. (351 aa)
A0A3F3PTM9HTH myb-type domain-containing protein. (960 aa)
A0A3F3PTK6DNA-directed RNA polymerase subunit E. (169 aa)
A0A3F3PTB2Transcription initiation factor IIF, beta subunit-domain-containing protein. (383 aa)
A0A3F3PSY3Leo1-like protein-domain-containing protein. (461 aa)
A0A3F3PS06Fungal-specific transcription factor domain-domain-containing protein. (729 aa)
A0A3F3PRR7Transcription factor S-II, central domain-domain-containing protein. (431 aa)
A0A3F3PRE9Transcription initiation factor TFIID subunit 13. (287 aa)
A0A3F3PNE2DNA-directed RNA polymerase. (157 aa)
A0A3F3PNC7Kinase-like domain-containing protein; Belongs to the protein kinase superfamily. (406 aa)
A0A3F3PNB0SEN1 N terminal-domain-containing protein. (2116 aa)
A0A3F3PMU6THO complex subunit 1 transcription elongation factor-domain-containing protein. (671 aa)
A0A3F3PLU4Uncharacterized protein. (386 aa)
Your Current Organism:
Aspergillus welwitschiae
NCBI taxonomy Id: 1341132
Other names: A. welwitschiae, Aspergillus welwitschiae (Bres.) Henn., CBS 139.54, Ustilago welwitschiae
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