STRINGSTRING
A0A3F3Q923 A0A3F3Q923 A0A3F3Q8C3 A0A3F3Q8C3 A0A3F3Q7D3 A0A3F3Q7D3 A0A3F3Q658 A0A3F3Q658 A0A3F3Q073 A0A3F3Q073 A0A3F3PZ81 A0A3F3PZ81 USB1 USB1 A0A3F3PXA3 A0A3F3PXA3 A0A3F3PPL8 A0A3F3PPL8 A0A3F3PMZ6 A0A3F3PMZ6 A0A3F3PHN1 A0A3F3PHN1 A0A3F3QJ76 A0A3F3QJ76 A0A3F3QJY0 A0A3F3QJY0 A0A3F3QHI1 A0A3F3QHI1 A0A3F3QE81 A0A3F3QE81 A0A3F3QD00 A0A3F3QD00 A0A3F3QCS8 A0A3F3QCS8 A0A3F3QCF3 A0A3F3QCF3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A3F3Q923Centromere/microtubule-binding protein cbf5. (485 aa)
A0A3F3Q8C3Ribosomal protein S5 domain 2-type protein. (292 aa)
A0A3F3Q7D3HA2 domain-containing protein. (313 aa)
A0A3F3Q658Exosome complex exonuclease Rrp6. (782 aa)
A0A3F3Q073Ribonuclease III domain-containing protein. (359 aa)
A0A3F3PZ81Ribosomal protein S5 domain 2-type protein. (385 aa)
USB1U6 snRNA phosphodiesterase; Phosphodiesterase responsible for the U6 snRNA 3' end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA; Belongs to the 2H phosphoesterase superfamily. USB1 family. (300 aa)
A0A3F3PXA3Sas10/Utp3/C1D family-domain-containing protein. (224 aa)
A0A3F3PPL8Uncharacterized protein. (249 aa)
A0A3F3PMZ6Ribosomal protein S5 domain 2-type protein. (403 aa)
A0A3F3PHN1IEC3 subunit of the Ino80 complex, chromatin re-modelling-domain-containing protein. (739 aa)
A0A3F3QJ76Uncharacterized protein. (279 aa)
A0A3F3QJY03' exoribonuclease family, domain 1-domain-containing protein. (269 aa)
A0A3F3QHI150S ribosomal protein L30e-like protein. (233 aa)
A0A3F3QE81Exonuclease domain-containing protein. (802 aa)
A0A3F3QD00Uncharacterized protein. (659 aa)
A0A3F3QCS8H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (296 aa)
A0A3F3QCF3Pseudouridine synthase. (737 aa)
Your Current Organism:
Aspergillus welwitschiae
NCBI taxonomy Id: 1341132
Other names: A. welwitschiae, Aspergillus welwitschiae (Bres.) Henn., CBS 139.54, Ustilago welwitschiae
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