24 items (Aspergillus welwitschiae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A3F3QIE3	RNA helicase. (802 aa)
	A0A3F3PKJ6	Bystin-domain-containing protein. (493 aa)
	A0A3F3PMI6	Nucleolar protein 14. (920 aa)
	A0A3F3PR14	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (720 aa)
	A0A3F3PT32	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (124 aa)
	A0A3F3PUM3	Ribosome biogenesis protein. (1180 aa)
	A0A3F3PW25	Uncharacterized protein. (1821 aa)
	A0A3F3PZI9	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family. (559 aa)
	A0A3F3PZP9	Bms1-type G domain-containing protein. (803 aa)
	A0A3F3Q0G2	Nucleolar RNA-binding protein. (67 aa)
	A0A3F3Q4B7	Uncharacterized protein. (901 aa)
	A0A3F3QHL2	Brix-domain-containing protein. (297 aa)
	A0A3F3QJH0	WD40 repeat-like protein. (541 aa)
	A0A3F3Q4K4	WD40-repeat-containing domain protein. (622 aa)
	A0A3F3Q4L4	Small nucleolar ribonucleo protein complex subunit. (976 aa)
	A0A3F3Q5H5	Nucleolar protein 58. (580 aa)
	A0A3F3Q5Y4	Putative pre-rRNA processing nucleolar protein Sik1. (519 aa)
	A0A3F3Q5Z5	U3 small nucleolar RNA-associated protein 6-domain-containing protein. (393 aa)
	A0A3F3Q8Q4	S4 RNA-binding domain-containing protein. (188 aa)
	A0A3F3Q976	Quinon protein alcohol dehydrogenase-like superfamily. (927 aa)
	A0A3F3QCS8	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (296 aa)
	A0A3F3QEX9	WD_REPEATS_REGION domain-containing protein. (962 aa)
	A0A3F3QHA4	U3 small nucleolar RNA-associated protein 10. (1800 aa)
	A0A3F3QHI1	50S ribosomal protein L30e-like protein. (233 aa)

Your Current Organism:

Aspergillus welwitschiae

NCBI taxonomy Id: 1341132
Other names: A. welwitschiae, Aspergillus welwitschiae (Bres.) Henn., CBS 139.54, Ustilago welwitschiae

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A3F3PKJ6	A0A3F3PMI6	Bystin-domain-containing protein.	Nucleolar protein 14.	0.997
A0A3F3PKJ6	A0A3F3PR14	Bystin-domain-containing protein.	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.	0.858
A0A3F3PKJ6	A0A3F3PT32	Bystin-domain-containing protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.981
A0A3F3PKJ6	A0A3F3PUM3	Bystin-domain-containing protein.	Ribosome biogenesis protein.	0.997
A0A3F3PKJ6	A0A3F3PW25	Bystin-domain-containing protein.	Uncharacterized protein.	0.997
A0A3F3PKJ6	A0A3F3PZI9	Bystin-domain-containing protein.	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.	0.744
A0A3F3PKJ6	A0A3F3PZP9	Bystin-domain-containing protein.	Bms1-type G domain-containing protein.	0.999
A0A3F3PKJ6	A0A3F3Q4B7	Bystin-domain-containing protein.	Uncharacterized protein.	0.628
A0A3F3PKJ6	A0A3F3Q4K4	Bystin-domain-containing protein.	WD40-repeat-containing domain protein.	0.997
A0A3F3PKJ6	A0A3F3Q4L4	Bystin-domain-containing protein.	Small nucleolar ribonucleo protein complex subunit.	0.993
A0A3F3PKJ6	A0A3F3Q5H5	Bystin-domain-containing protein.	Nucleolar protein 58.	0.994
A0A3F3PKJ6	A0A3F3Q5Y4	Bystin-domain-containing protein.	Putative pre-rRNA processing nucleolar protein Sik1.	0.991
A0A3F3PKJ6	A0A3F3Q5Z5	Bystin-domain-containing protein.	U3 small nucleolar RNA-associated protein 6-domain-containing protein.	0.995
A0A3F3PKJ6	A0A3F3Q8Q4	Bystin-domain-containing protein.	S4 RNA-binding domain-containing protein.	0.997
A0A3F3PKJ6	A0A3F3Q976	Bystin-domain-containing protein.	Quinon protein alcohol dehydrogenase-like superfamily.	0.992
A0A3F3PKJ6	A0A3F3QEX9	Bystin-domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.996
A0A3F3PKJ6	A0A3F3QHA4	Bystin-domain-containing protein.	U3 small nucleolar RNA-associated protein 10.	0.990
A0A3F3PKJ6	A0A3F3QHI1	Bystin-domain-containing protein.	50S ribosomal protein L30e-like protein.	0.951
A0A3F3PKJ6	A0A3F3QHL2	Bystin-domain-containing protein.	Brix-domain-containing protein.	0.995
A0A3F3PKJ6	A0A3F3QIE3	Bystin-domain-containing protein.	RNA helicase.	0.952