(4 nodes) Retromer complex network (Aspergillus welwitschiae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A3F3PR12	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family. (427 aa)
	A0A3F3QDF2	Vacuolar protein sorting-associated protein 26. (271 aa)
	A0A3F3Q8T3	Vacuolar protein sorting-associated protein 17; Plays a role in vesicular protein sorting. Belongs to the VPS17 family. (588 aa)
	A0A3F3Q5M2	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (866 aa)

Your Current Organism:

Aspergillus welwitschiae

NCBI taxonomy Id: 1341132
Other names: A. welwitschiae, Aspergillus welwitschiae (Bres.) Henn., CBS 139.54, Ustilago welwitschiae

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A3F3PR12	A0A3F3Q5M2	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.998
A0A3F3PR12	A0A3F3Q8T3	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	Vacuolar protein sorting-associated protein 17; Plays a role in vesicular protein sorting. Belongs to the VPS17 family.	0.977
A0A3F3PR12	A0A3F3QDF2	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	Vacuolar protein sorting-associated protein 26.	0.998
A0A3F3Q5M2	A0A3F3PR12	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	0.998
A0A3F3Q5M2	A0A3F3Q8T3	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	Vacuolar protein sorting-associated protein 17; Plays a role in vesicular protein sorting. Belongs to the VPS17 family.	0.958
A0A3F3Q5M2	A0A3F3QDF2	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	Vacuolar protein sorting-associated protein 26.	0.999
A0A3F3Q8T3	A0A3F3PR12	Vacuolar protein sorting-associated protein 17; Plays a role in vesicular protein sorting. Belongs to the VPS17 family.	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	0.977
A0A3F3Q8T3	A0A3F3Q5M2	Vacuolar protein sorting-associated protein 17; Plays a role in vesicular protein sorting. Belongs to the VPS17 family.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.958
A0A3F3Q8T3	A0A3F3QDF2	Vacuolar protein sorting-associated protein 17; Plays a role in vesicular protein sorting. Belongs to the VPS17 family.	Vacuolar protein sorting-associated protein 26.	0.866
A0A3F3QDF2	A0A3F3PR12	Vacuolar protein sorting-associated protein 26.	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	0.998
A0A3F3QDF2	A0A3F3Q5M2	Vacuolar protein sorting-associated protein 26.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.999
A0A3F3QDF2	A0A3F3Q8T3	Vacuolar protein sorting-associated protein 26.	Vacuolar protein sorting-associated protein 17; Plays a role in vesicular protein sorting. Belongs to the VPS17 family.	0.866