20 items (Aspergillus welwitschiae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A3F3QG86	Uncharacterized protein. (588 aa)
	A0A3F3PHY5	TBC-domain-containing protein. (504 aa)
	A0A3F3PMJ6	Uncharacterized protein. (207 aa)
	A0A3F3PMU8	Uncharacterized protein. (1013 aa)
	A0A3F3PMX2	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (324 aa)
	A0A3F3PRG3	Kinase-like domain-containing protein. (1082 aa)
	A0A3F3PSZ5	WD40 repeat-like protein. (2019 aa)
	A0A3F3PTE6	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (472 aa)
	A0A3F3PXL0	Mob1/phocein. (218 aa)
	A0A3F3PZT3	Protein kinase-like protein. (257 aa)
	A0A3F3Q0Q3	Uncharacterized protein. (988 aa)
	A0A3F3Q4H1	Phosphatases II. (607 aa)
	A0A3F3Q8W9	Kinase-like domain-containing protein; Belongs to the protein kinase superfamily. (397 aa)
	A0A3F3QA15	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (316 aa)
	A0A3F3QAL1	Serine/threonine-protein kinase ark1; Belongs to the protein kinase superfamily. (439 aa)
	A0A3F3QBV2	P-loop containing nucleoside triphosphate hydrolase protein. (311 aa)
	A0A3F3QDZ6	Uncharacterized protein. (808 aa)
	A0A3F3QF67	CNH domain protein. (1836 aa)
	A0A3F3QFI6	Pkinase-domain-containing protein. (1141 aa)
	A0A3F3QFQ9	Bestrophin, RFP-TM, chloride channel-domain-containing protein. (399 aa)

Your Current Organism:

Aspergillus welwitschiae

NCBI taxonomy Id: 1341132
Other names: A. welwitschiae, Aspergillus welwitschiae (Bres.) Henn., CBS 139.54, Ustilago welwitschiae

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A3F3PHY5	A0A3F3PTE6	TBC-domain-containing protein.	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.947
A0A3F3PHY5	A0A3F3PXL0	TBC-domain-containing protein.	Mob1/phocein.	0.651
A0A3F3PHY5	A0A3F3Q0Q3	TBC-domain-containing protein.	Uncharacterized protein.	0.946
A0A3F3PHY5	A0A3F3Q4H1	TBC-domain-containing protein.	Phosphatases II.	0.971
A0A3F3PHY5	A0A3F3QBV2	TBC-domain-containing protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.997
A0A3F3PHY5	A0A3F3QFI6	TBC-domain-containing protein.	Pkinase-domain-containing protein.	0.989
A0A3F3PHY5	A0A3F3QFQ9	TBC-domain-containing protein.	Bestrophin, RFP-TM, chloride channel-domain-containing protein.	0.687
A0A3F3PHY5	A0A3F3QG86	TBC-domain-containing protein.	Uncharacterized protein.	0.687
A0A3F3PMJ6	A0A3F3PMU8	Uncharacterized protein.	Uncharacterized protein.	0.916
A0A3F3PMJ6	A0A3F3QFI6	Uncharacterized protein.	Pkinase-domain-containing protein.	0.492
A0A3F3PMU8	A0A3F3PMJ6	Uncharacterized protein.	Uncharacterized protein.	0.916
A0A3F3PMU8	A0A3F3QFI6	Uncharacterized protein.	Pkinase-domain-containing protein.	0.492
A0A3F3PMX2	A0A3F3PTE6	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.883
A0A3F3PMX2	A0A3F3PXL0	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	Mob1/phocein.	0.468
A0A3F3PMX2	A0A3F3PZT3	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	Protein kinase-like protein.	0.591
A0A3F3PMX2	A0A3F3Q4H1	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	Phosphatases II.	0.488
A0A3F3PMX2	A0A3F3Q8W9	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.	0.650
A0A3F3PMX2	A0A3F3QAL1	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	Serine/threonine-protein kinase ark1; Belongs to the protein kinase superfamily.	0.650
A0A3F3PMX2	A0A3F3QBV2	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	P-loop containing nucleoside triphosphate hydrolase protein.	0.422
A0A3F3PMX2	A0A3F3QFI6	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	Pkinase-domain-containing protein.	0.849