Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| A0A3F3PKL1 | A0A3F3PNC7 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | Kinase-like domain-containing protein; Belongs to the protein kinase superfamily. | 0.892 |
| A0A3F3PKL1 | A0A3F3PZ53 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | Uncharacterized protein. | 0.692 |
| A0A3F3PKL1 | A0A3F3Q7L4 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.738 |
| A0A3F3PKL1 | A0A3F3QCM7 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.833 |
| A0A3F3PKL1 | A0A3F3QK24 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | Cyclin-like protein; Belongs to the cyclin family. | 0.692 |
| A0A3F3PKY7 | A0A3F3PNC7 | Protein kinase domain-containing protein. | Kinase-like domain-containing protein; Belongs to the protein kinase superfamily. | 0.803 |
| A0A3F3PKY7 | A0A3F3PSY3 | Protein kinase domain-containing protein. | Leo1-like protein-domain-containing protein. | 0.501 |
| A0A3F3PKY7 | A0A3F3PXT7 | Protein kinase domain-containing protein. | U3 snoRNA associated-domain-containing protein. | 0.654 |
| A0A3F3PKY7 | A0A3F3PY39 | Protein kinase domain-containing protein. | RNA pol II accessory factor, Cdc73 family-domain-containing protein. | 0.599 |
| A0A3F3PKY7 | A0A3F3PY91 | Protein kinase domain-containing protein. | CTD kinase subunit gamma CTK3-domain-containing protein. | 0.654 |
| A0A3F3PKY7 | A0A3F3PZ53 | Protein kinase domain-containing protein. | Uncharacterized protein. | 0.852 |
| A0A3F3PKY7 | A0A3F3Q7L4 | Protein kinase domain-containing protein. | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.760 |
| A0A3F3PKY7 | A0A3F3QCM7 | Protein kinase domain-containing protein. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.623 |
| A0A3F3PKY7 | A0A3F3QJF1 | Protein kinase domain-containing protein. | RNA polymerase II transcription elongation factor Rtf1p. | 0.493 |
| A0A3F3PKY7 | A0A3F3QK24 | Protein kinase domain-containing protein. | Cyclin-like protein; Belongs to the cyclin family. | 0.852 |
| A0A3F3PMY1 | A0A3F3PYL2 | P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family. | P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family. | 0.999 |
| A0A3F3PMY1 | A0A3F3Q0N8 | P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family. | Protein kinase domain-containing protein. | 0.489 |
| A0A3F3PMY1 | A0A3F3QCM7 | P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.516 |
| A0A3F3PNC7 | A0A3F3PKL1 | Kinase-like domain-containing protein; Belongs to the protein kinase superfamily. | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | 0.892 |
| A0A3F3PNC7 | A0A3F3PKY7 | Kinase-like domain-containing protein; Belongs to the protein kinase superfamily. | Protein kinase domain-containing protein. | 0.803 |
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