63 items (Aspergillus welwitschiae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A3F3Q3Y5	Ubiquitin conjugating enzyme. (1072 aa)
	A0A3F3Q2X6	RING finger domain protein. (444 aa)
	A0A3F3Q1T3	CTLH/CRA C-terminal to lish motif domain-domain-containing protein. (272 aa)
	A0A3F3Q1I1	HECT domain-containing protein. (1229 aa)
	A0A3F3Q181	Uncharacterized protein. (587 aa)
	A0A3F3Q0V9	Putative zinc finger in N-recognin-domain-containing protein. (546 aa)
	A0A3F3PXU2	RING-type domain-containing protein. (714 aa)
	A0A3F3Q543	RING-type domain-containing protein. (554 aa)
	A0A3F3Q5A5	Uncharacterized protein. (379 aa)
	A0A3F3Q5D9	Goodbye domain-containing protein. (1551 aa)
	A0A3F3Q617	RING finger domain protein. (360 aa)
	A0A3F3Q7K5	WHIM1 domain-containing protein. (593 aa)
	A0A3F3Q7T1	RING-type domain-containing protein. (119 aa)
	A0A3F3Q7X8	Protein fyv10. (406 aa)
	A0A3F3Q8D8	Uncharacterized protein. (2141 aa)
	A0A3F3Q8L6	RING-type domain-containing protein. (385 aa)
	A0A3F3Q9I8	Anaphase-promoting complex subunit 11. (90 aa)
	A0A3F3Q9Q3	RING-CH-type domain-containing protein. (1612 aa)
	A0A3F3QAK0	Uncharacterized protein. (375 aa)
	A0A3F3QAW9	HECT domain-containing protein. (1809 aa)
	A0A3F3QAY0	RING-type domain-containing protein. (856 aa)
	A0A3F3QBI9	RBR-type E3 ubiquitin transferase. (511 aa)
	A0A3F3QBK3	CHY-type domain-containing protein. (696 aa)
	A0A3F3QBR9	RING-type domain-containing protein. (223 aa)
	A0A3F3QBV0	E3 ubiquitin-protein ligase PEP5. (947 aa)
	A0A3F3QBX6	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (2150 aa)
	A0A3F3QD28	RING-type domain-containing protein. (272 aa)
	A0A3F3QDL1	RING-type domain-containing protein. (785 aa)
	A0A3F3QEA8	RBR-type E3 ubiquitin transferase. (610 aa)
	A0A3F3QFQ9	Bestrophin, RFP-TM, chloride channel-domain-containing protein. (399 aa)
	A0A3F3QG86	Uncharacterized protein. (588 aa)
	A0A3F3QGT2	RING-type domain-containing protein. (1626 aa)
	A0A3F3QH33	Prp19-domain-containing protein. (476 aa)
	A0A3F3QK93	RING-type domain-containing protein. (116 aa)
	A0A3F3QKH0	PA and RING finger domain protein. (878 aa)
	A0A3F3QKS7	RING-type domain-containing protein. (193 aa)
	A0A3F3PIB0	RING-type domain-containing protein. (828 aa)
	A0A3F3PJ52	RBR-type E3 ubiquitin transferase. (495 aa)
	A0A3F3PK49	Uncharacterized protein. (284 aa)
	A0A3F3PKR1	IBR domain-containing protein. (729 aa)
	A0A3F3PL35	Uncharacterized protein. (588 aa)
	A0A3F3PLQ7	RING-type domain-containing protein. (708 aa)
	A0A3F3PMD6	RING-type domain-containing protein. (441 aa)
	A0A3F3PMW0	RBR-type E3 ubiquitin transferase. (361 aa)
	A0A3F3PN42	Ubiquitin-conjugating enzyme E2-binding protein. (431 aa)
	A0A3F3PNF1	Pex12 amino terminal region-domain-containing protein. (378 aa)
	A0A3F3PNG3	Uncharacterized protein. (711 aa)
	A0A3F3PPQ8	Uncharacterized protein. (395 aa)
	A0A3F3PQ11	Uncharacterized protein. (162 aa)
	A0A3F3PR08	Ubiquitin-protein ligase. (4048 aa)
	A0A3F3PR54	Uncharacterized protein. (707 aa)
	A0A3F3PR71	CHY and RING finger domain protein. (741 aa)
	A0A3F3PR81	RING-type domain-containing protein. (464 aa)
	A0A3F3PR99	E3 ubiquitin-protein ligase. (827 aa)
	A0A3F3PRQ2	Altered inheritance of mitochondria protein 24, mitochondrial. (361 aa)
	A0A3F3PS20	Rieske domain-containing protein. (174 aa)
	A0A3F3PT59	DWNN domain-domain-containing protein. (608 aa)
	A0A3F3PUC2	PUA-like domain-containing protein. (645 aa)
	A0A3F3PUP3	Uncharacterized protein. (517 aa)
	A0A3F3PXA6	RBR-type E3 ubiquitin transferase. (511 aa)
	A0A3F3Q4Q6	Uncharacterized protein. (424 aa)
	A0A3F3Q4P6	Ubiquitin elongating factor core-domain-containing protein. (1073 aa)
	A0A3F3Q4H7	Uncharacterized protein. (468 aa)

Your Current Organism:

Aspergillus welwitschiae

NCBI taxonomy Id: 1341132
Other names: A. welwitschiae, Aspergillus welwitschiae (Bres.) Henn., CBS 139.54, Ustilago welwitschiae

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A3F3PIB0	A0A3F3Q3Y5	RING-type domain-containing protein.	Ubiquitin conjugating enzyme.	0.496
A0A3F3PIB0	A0A3F3QAW9	RING-type domain-containing protein.	HECT domain-containing protein.	0.687
A0A3F3PJ52	A0A3F3PXA6	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.664
A0A3F3PJ52	A0A3F3Q5A5	RBR-type E3 ubiquitin transferase.	Uncharacterized protein.	0.664
A0A3F3PJ52	A0A3F3Q7T1	RBR-type E3 ubiquitin transferase.	RING-type domain-containing protein.	0.460
A0A3F3PK49	A0A3F3PR99	Uncharacterized protein.	E3 ubiquitin-protein ligase.	0.446
A0A3F3PK49	A0A3F3Q3Y5	Uncharacterized protein.	Ubiquitin conjugating enzyme.	0.706
A0A3F3PK49	A0A3F3Q4P6	Uncharacterized protein.	Ubiquitin elongating factor core-domain-containing protein.	0.715
A0A3F3PK49	A0A3F3QAW9	Uncharacterized protein.	HECT domain-containing protein.	0.723
A0A3F3PKR1	A0A3F3PXA6	IBR domain-containing protein.	RBR-type E3 ubiquitin transferase.	0.664
A0A3F3PKR1	A0A3F3Q5A5	IBR domain-containing protein.	Uncharacterized protein.	0.664
A0A3F3PKR1	A0A3F3Q7T1	IBR domain-containing protein.	RING-type domain-containing protein.	0.460
A0A3F3PL35	A0A3F3QAW9	Uncharacterized protein.	HECT domain-containing protein.	0.741
A0A3F3PLQ7	A0A3F3PR99	RING-type domain-containing protein.	E3 ubiquitin-protein ligase.	0.481
A0A3F3PMW0	A0A3F3PXA6	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.664
A0A3F3PMW0	A0A3F3Q5A5	RBR-type E3 ubiquitin transferase.	Uncharacterized protein.	0.664
A0A3F3PMW0	A0A3F3Q7T1	RBR-type E3 ubiquitin transferase.	RING-type domain-containing protein.	0.460
A0A3F3PN42	A0A3F3PRQ2	Ubiquitin-conjugating enzyme E2-binding protein.	Altered inheritance of mitochondria protein 24, mitochondrial.	0.947
A0A3F3PN42	A0A3F3PT59	Ubiquitin-conjugating enzyme E2-binding protein.	DWNN domain-domain-containing protein.	0.976
A0A3F3PNF1	A0A3F3Q3Y5	Pex12 amino terminal region-domain-containing protein.	Ubiquitin conjugating enzyme.	0.614