STRINGSTRING
A0A3F3PVN9 A0A3F3PVN9 A0A3F3QDK3 A0A3F3QDK3 A0A3F3QCV4 A0A3F3QCV4 A0A3F3QB07 A0A3F3QB07 A0A3F3QAL9 A0A3F3QAL9 A0A3F3QAC8 A0A3F3QAC8 A0A3F3Q5C5 A0A3F3Q5C5 A0A3F3Q504 A0A3F3Q504 A0A3F3Q3J2 A0A3F3Q3J2 A0A3F3Q2L0 A0A3F3Q2L0 A0A3F3Q225 A0A3F3Q225 A0A3F3Q1L5 A0A3F3Q1L5 A0A3F3Q080 A0A3F3Q080 A0A3F3PYF6 A0A3F3PYF6 A0A3F3PXT5 A0A3F3PXT5 A0A3F3PJP1 A0A3F3PJP1 A0A3F3PU58 A0A3F3PU58 A0A3F3PU35 A0A3F3PU35 A0A3F3PSA4 A0A3F3PSA4 A0A3F3PK96 A0A3F3PK96 A0A3F3PK22 A0A3F3PK22 A0A3F3QIJ6 A0A3F3QIJ6 A0A3F3QG88 A0A3F3QG88 A0A3F3QFV8 A0A3F3QFV8 A0A3F3QF73 A0A3F3QF73 A0A3F3QDR1 A0A3F3QDR1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A3F3PVN9Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (119 aa)
A0A3F3QDK3U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (414 aa)
A0A3F3QCV4Matrin-type domain-containing protein. (238 aa)
A0A3F3QB07Uncharacterized protein. (573 aa)
A0A3F3QAL9Uncharacterized protein. (277 aa)
A0A3F3QAC8Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (121 aa)
A0A3F3Q5C5PWI domain-containing protein. (738 aa)
A0A3F3Q504Sm domain-containing protein. (220 aa)
A0A3F3Q3J2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (571 aa)
A0A3F3Q2L0Sm domain-containing protein. (137 aa)
A0A3F3Q225Concanavalin A-like lectin/glucanase domain-containing protein. (486 aa)
A0A3F3Q1L5PSP domain-containing protein. (547 aa)
A0A3F3Q080RRM domain-containing protein. (177 aa)
A0A3F3PYF6Surp module. (538 aa)
A0A3F3PXT5Small nuclear ribonucleoprotein G. (78 aa)
A0A3F3PJP1Pre-mRNA-processing ATP-dependent RNA helicase prp5. (1180 aa)
A0A3F3PU58KH domain-containing protein. (283 aa)
A0A3F3PU35Concanavalin A-like lectin/glucanase domain-containing protein. (396 aa)
A0A3F3PSA4C2H2-type domain-containing protein. (505 aa)
A0A3F3PK96U2 snRNP component prp10. (1232 aa)
A0A3F3PK22Uncharacterized protein. (677 aa)
A0A3F3QIJ6Uncharacterized protein. (797 aa)
A0A3F3QG88U1 small nuclear ribonucleo protein of 70kDa MW N terminal-domain-containing protein. (389 aa)
A0A3F3QFV8Small nuclear ribonucleoprotein Sm D2. (115 aa)
A0A3F3QF73Uncharacterized protein. (1578 aa)
A0A3F3QDR1Uncharacterized protein. (351 aa)
Your Current Organism:
Aspergillus welwitschiae
NCBI taxonomy Id: 1341132
Other names: A. welwitschiae, Aspergillus welwitschiae (Bres.) Henn., CBS 139.54, Ustilago welwitschiae
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