23 items (Aspergillus welwitschiae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A3F3PND6	Serine-threonine protein kinase 19-domain-containing protein. (383 aa)
	A0A3F3PR78	RIC1-domain-containing protein. (1043 aa)
	A0A3F3PU87	Uncharacterized protein. (1125 aa)
	A0A3F3PVL5	Uncharacterized protein. (1452 aa)
	A0A3F3PWT2	Folliculin-interacting protein N-terminus-domain-containing protein. (1210 aa)
	A0A3F3PXL0	Mob1/phocein. (218 aa)
	A0A3F3PY64	WD40-repeat-containing domain protein; Belongs to the WD repeat SEC13 family. (375 aa)
	A0A3F3Q0G9	CID domain-containing protein. (578 aa)
	A0A3F3Q2L7	Cdc37 N terminal kinase binding-domain-containing protein. (489 aa)
	A0A3F3Q313	Gtr1/RagA G protein conserved region-domain-containing protein. (383 aa)
	A0A3F3Q3A6	Gtr1/RagA G protein conserved region-domain-containing protein. (333 aa)
	A0A3F3Q403	Rad2-like endonuclease. (875 aa)
	A0A3F3Q4H1	Phosphatases II. (607 aa)
	A0A3F3Q564	Protein transport protein sec13; Belongs to the WD repeat SEC13 family. (308 aa)
	A0A3F3Q5R2	Cytochrome b5-like heme/steroid binding domain-containing protein; Belongs to the cytochrome b5 family. (127 aa)
	A0A3F3Q6R0	Uncharacterized protein. (181 aa)
	A0A3F3QAU5	Uncharacterized protein. (151 aa)
	A0A3F3QBI6	Uncharacterized protein. (336 aa)
	A0A3F3QFI6	Pkinase-domain-containing protein. (1141 aa)
	A0A3F3QJ55	Vesicle coat protein. (485 aa)
	A0A3F3QK54	WD_REPEATS_REGION domain-containing protein. (1357 aa)
	A0A3F3QKF1	Uncharacterized protein. (915 aa)
	A0A3F3QKN9	KptA family-domain-containing protein. (1274 aa)

Your Current Organism:

Aspergillus welwitschiae

NCBI taxonomy Id: 1341132
Other names: A. welwitschiae, Aspergillus welwitschiae (Bres.) Henn., CBS 139.54, Ustilago welwitschiae

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A3F3PU87	A0A3F3PY64	Uncharacterized protein.	WD40-repeat-containing domain protein; Belongs to the WD repeat SEC13 family.	0.547
A0A3F3PU87	A0A3F3Q564	Uncharacterized protein.	Protein transport protein sec13; Belongs to the WD repeat SEC13 family.	0.523
A0A3F3PVL5	A0A3F3PY64	Uncharacterized protein.	WD40-repeat-containing domain protein; Belongs to the WD repeat SEC13 family.	0.994
A0A3F3PVL5	A0A3F3Q313	Uncharacterized protein.	Gtr1/RagA G protein conserved region-domain-containing protein.	0.800
A0A3F3PVL5	A0A3F3Q3A6	Uncharacterized protein.	Gtr1/RagA G protein conserved region-domain-containing protein.	0.807
A0A3F3PVL5	A0A3F3Q564	Uncharacterized protein.	Protein transport protein sec13; Belongs to the WD repeat SEC13 family.	0.995
A0A3F3PVL5	A0A3F3Q6R0	Uncharacterized protein.	Uncharacterized protein.	0.669
A0A3F3PVL5	A0A3F3QAU5	Uncharacterized protein.	Uncharacterized protein.	0.669
A0A3F3PVL5	A0A3F3QBI6	Uncharacterized protein.	Uncharacterized protein.	0.669
A0A3F3PVL5	A0A3F3QJ55	Uncharacterized protein.	Vesicle coat protein.	0.476
A0A3F3PVL5	A0A3F3QK54	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.997
A0A3F3PVL5	A0A3F3QKN9	Uncharacterized protein.	KptA family-domain-containing protein.	0.998
A0A3F3PWT2	A0A3F3QJ55	Folliculin-interacting protein N-terminus-domain-containing protein.	Vesicle coat protein.	0.479
A0A3F3PXL0	A0A3F3Q4H1	Mob1/phocein.	Phosphatases II.	0.955
A0A3F3PXL0	A0A3F3QFI6	Mob1/phocein.	Pkinase-domain-containing protein.	0.549
A0A3F3PY64	A0A3F3PU87	WD40-repeat-containing domain protein; Belongs to the WD repeat SEC13 family.	Uncharacterized protein.	0.547
A0A3F3PY64	A0A3F3PVL5	WD40-repeat-containing domain protein; Belongs to the WD repeat SEC13 family.	Uncharacterized protein.	0.994
A0A3F3PY64	A0A3F3Q313	WD40-repeat-containing domain protein; Belongs to the WD repeat SEC13 family.	Gtr1/RagA G protein conserved region-domain-containing protein.	0.792
A0A3F3PY64	A0A3F3Q3A6	WD40-repeat-containing domain protein; Belongs to the WD repeat SEC13 family.	Gtr1/RagA G protein conserved region-domain-containing protein.	0.802
A0A3F3PY64	A0A3F3Q564	WD40-repeat-containing domain protein; Belongs to the WD repeat SEC13 family.	Protein transport protein sec13; Belongs to the WD repeat SEC13 family.	0.997