(12 nodes) Preribosome, small subunit precursor network (Aspergillus welwitschiae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A3F3QHF1	ARM repeat-containing protein. (710 aa)
	A0A3F3PKJ6	Bystin-domain-containing protein. (493 aa)
	A0A3F3PMI6	Nucleolar protein 14. (920 aa)
	A0A3F3PTH1	CBF/Mak21 family-domain-containing protein. (549 aa)
	A0A3F3PZP9	Bms1-type G domain-containing protein. (803 aa)
	A0A3F3Q4V6	RRM domain-containing protein. (467 aa)
	A0A3F3Q753	Rio2, N-terminal-domain-containing protein. (402 aa)
	A0A3F3Q7V1	Low temperature viability protein. (493 aa)
	A0A3F3QBS0	Armadillo-type protein. (2610 aa)
	A0A3F3QDG3	Ribosome biogenesis protein SLX9-domain-containing protein. (172 aa)
	A0A3F3QHV5	Nucleolar protein,Nop52-domain-containing protein. (317 aa)
	A0A3F3QJE5	rRNA-processing protein efg1. (316 aa)

Your Current Organism:

Aspergillus welwitschiae

NCBI taxonomy Id: 1341132
Other names: A. welwitschiae, Aspergillus welwitschiae (Bres.) Henn., CBS 139.54, Ustilago welwitschiae

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A3F3PKJ6	A0A3F3PMI6	Bystin-domain-containing protein.	Nucleolar protein 14.	0.997
A0A3F3PKJ6	A0A3F3PTH1	Bystin-domain-containing protein.	CBF/Mak21 family-domain-containing protein.	0.997
A0A3F3PKJ6	A0A3F3PZP9	Bystin-domain-containing protein.	Bms1-type G domain-containing protein.	0.999
A0A3F3PKJ6	A0A3F3Q4V6	Bystin-domain-containing protein.	RRM domain-containing protein.	0.898
A0A3F3PKJ6	A0A3F3Q753	Bystin-domain-containing protein.	Rio2, N-terminal-domain-containing protein.	0.994
A0A3F3PKJ6	A0A3F3Q7V1	Bystin-domain-containing protein.	Low temperature viability protein.	0.999
A0A3F3PKJ6	A0A3F3QBS0	Bystin-domain-containing protein.	Armadillo-type protein.	0.991
A0A3F3PKJ6	A0A3F3QHF1	Bystin-domain-containing protein.	ARM repeat-containing protein.	0.949
A0A3F3PKJ6	A0A3F3QHV5	Bystin-domain-containing protein.	Nucleolar protein,Nop52-domain-containing protein.	0.850
A0A3F3PKJ6	A0A3F3QJE5	Bystin-domain-containing protein.	rRNA-processing protein efg1.	0.490
A0A3F3PMI6	A0A3F3PKJ6	Nucleolar protein 14.	Bystin-domain-containing protein.	0.997
A0A3F3PMI6	A0A3F3PTH1	Nucleolar protein 14.	CBF/Mak21 family-domain-containing protein.	0.999
A0A3F3PMI6	A0A3F3PZP9	Nucleolar protein 14.	Bms1-type G domain-containing protein.	0.937
A0A3F3PMI6	A0A3F3Q4V6	Nucleolar protein 14.	RRM domain-containing protein.	0.897
A0A3F3PMI6	A0A3F3Q753	Nucleolar protein 14.	Rio2, N-terminal-domain-containing protein.	0.799
A0A3F3PMI6	A0A3F3Q7V1	Nucleolar protein 14.	Low temperature viability protein.	0.923
A0A3F3PMI6	A0A3F3QBS0	Nucleolar protein 14.	Armadillo-type protein.	0.999
A0A3F3PMI6	A0A3F3QHF1	Nucleolar protein 14.	ARM repeat-containing protein.	0.648
A0A3F3PMI6	A0A3F3QHV5	Nucleolar protein 14.	Nucleolar protein,Nop52-domain-containing protein.	0.802
A0A3F3PMI6	A0A3F3QJE5	Nucleolar protein 14.	rRNA-processing protein efg1.	0.445