6 items (Aspergillus welwitschiae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A3F3Q249	Plasma membrane phosphate transporter Pho87. (1399 aa)
	BDQ94DRAFT_704	SPX domain protein. (794 aa)
	A0A3F3QEK6	Ankyrin. (1053 aa)
	A0A3F3Q8T6	VTC domain-domain-containing protein. (808 aa)
	A0A3F3Q6V6	Glycerophosphoryl diester phosphodiesterase family-domain-containing protein. (1197 aa)
	A0A3F3Q6C7	Uncharacterized protein. (1034 aa)

Your Current Organism:

Aspergillus welwitschiae

NCBI taxonomy Id: 1341132
Other names: A. welwitschiae, Aspergillus welwitschiae (Bres.) Henn., CBS 139.54, Ustilago welwitschiae

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A3F3Q249	A0A3F3Q6C7	A0A3F3Q249	A0A3F3Q6C7	Plasma membrane phosphate transporter Pho87.	Uncharacterized protein.	0.596
A0A3F3Q249	A0A3F3Q6V6	A0A3F3Q249	A0A3F3Q6V6	Plasma membrane phosphate transporter Pho87.	Glycerophosphoryl diester phosphodiesterase family-domain-containing protein.	0.608
A0A3F3Q249	A0A3F3QEK6	A0A3F3Q249	A0A3F3QEK6	Plasma membrane phosphate transporter Pho87.	Ankyrin.	0.608
A0A3F3Q249	BDQ94DRAFT_704	A0A3F3Q249	A0A3F3QIK5	Plasma membrane phosphate transporter Pho87.	SPX domain protein.	0.512
A0A3F3Q6C7	A0A3F3Q249	A0A3F3Q6C7	A0A3F3Q249	Uncharacterized protein.	Plasma membrane phosphate transporter Pho87.	0.596
A0A3F3Q6C7	A0A3F3Q6V6	A0A3F3Q6C7	A0A3F3Q6V6	Uncharacterized protein.	Glycerophosphoryl diester phosphodiesterase family-domain-containing protein.	0.958
A0A3F3Q6C7	A0A3F3Q8T6	A0A3F3Q6C7	A0A3F3Q8T6	Uncharacterized protein.	VTC domain-domain-containing protein.	0.759
A0A3F3Q6C7	A0A3F3QEK6	A0A3F3Q6C7	A0A3F3QEK6	Uncharacterized protein.	Ankyrin.	0.958
A0A3F3Q6C7	BDQ94DRAFT_704	A0A3F3Q6C7	A0A3F3QIK5	Uncharacterized protein.	SPX domain protein.	0.863
A0A3F3Q6V6	A0A3F3Q249	A0A3F3Q6V6	A0A3F3Q249	Glycerophosphoryl diester phosphodiesterase family-domain-containing protein.	Plasma membrane phosphate transporter Pho87.	0.608
A0A3F3Q6V6	A0A3F3Q6C7	A0A3F3Q6V6	A0A3F3Q6C7	Glycerophosphoryl diester phosphodiesterase family-domain-containing protein.	Uncharacterized protein.	0.958
A0A3F3Q6V6	A0A3F3Q8T6	A0A3F3Q6V6	A0A3F3Q8T6	Glycerophosphoryl diester phosphodiesterase family-domain-containing protein.	VTC domain-domain-containing protein.	0.733
A0A3F3Q6V6	A0A3F3QEK6	A0A3F3Q6V6	A0A3F3QEK6	Glycerophosphoryl diester phosphodiesterase family-domain-containing protein.	Ankyrin.	0.955
A0A3F3Q6V6	BDQ94DRAFT_704	A0A3F3Q6V6	A0A3F3QIK5	Glycerophosphoryl diester phosphodiesterase family-domain-containing protein.	SPX domain protein.	0.751
A0A3F3Q8T6	A0A3F3Q6C7	A0A3F3Q8T6	A0A3F3Q6C7	VTC domain-domain-containing protein.	Uncharacterized protein.	0.759
A0A3F3Q8T6	A0A3F3Q6V6	A0A3F3Q8T6	A0A3F3Q6V6	VTC domain-domain-containing protein.	Glycerophosphoryl diester phosphodiesterase family-domain-containing protein.	0.733
A0A3F3Q8T6	A0A3F3QEK6	A0A3F3Q8T6	A0A3F3QEK6	VTC domain-domain-containing protein.	Ankyrin.	0.733
A0A3F3Q8T6	BDQ94DRAFT_704	A0A3F3Q8T6	A0A3F3QIK5	VTC domain-domain-containing protein.	SPX domain protein.	0.887
A0A3F3QEK6	A0A3F3Q249	A0A3F3QEK6	A0A3F3Q249	Ankyrin.	Plasma membrane phosphate transporter Pho87.	0.608
A0A3F3QEK6	A0A3F3Q6C7	A0A3F3QEK6	A0A3F3Q6C7	Ankyrin.	Uncharacterized protein.	0.958