10 items (Aspergillus welwitschiae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A3F3Q3D2	Proteasome subunit alpha type. (253 aa)
	A0A3F3PMC7	Proteasome subunit beta. (232 aa)
	A0A3F3PSD9	Proteasome subunit alpha type. (270 aa)
	A0A3F3PVR6	Proteasome subunit alpha type. (279 aa)
	A0A3F3PY82	Proteasome subunit alpha type. (246 aa)
	A0A3F3PYL1	Proteasome subunit alpha type. (297 aa)
	A0A3F3PZ89	Proteasome subunit beta; Belongs to the peptidase T1B family. (260 aa)
	A0A3F3Q4L9	Proteasome subunit beta. (206 aa)
	A0A3F3QBV4	Proteasome subunit alpha type. (255 aa)
	A0A3F3QDG4	Proteasome subunit alpha type. (262 aa)

Your Current Organism:

Aspergillus welwitschiae

NCBI taxonomy Id: 1341132
Other names: A. welwitschiae, Aspergillus welwitschiae (Bres.) Henn., CBS 139.54, Ustilago welwitschiae

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A3F3PMC7	A0A3F3PSD9	Proteasome subunit beta.	Proteasome subunit alpha type.	0.999
A0A3F3PMC7	A0A3F3PVR6	Proteasome subunit beta.	Proteasome subunit alpha type.	0.999
A0A3F3PMC7	A0A3F3PY82	Proteasome subunit beta.	Proteasome subunit alpha type.	0.999
A0A3F3PMC7	A0A3F3PYL1	Proteasome subunit beta.	Proteasome subunit alpha type.	0.999
A0A3F3PMC7	A0A3F3PZ89	Proteasome subunit beta.	Proteasome subunit beta; Belongs to the peptidase T1B family.	0.999
A0A3F3PMC7	A0A3F3Q3D2	Proteasome subunit beta.	Proteasome subunit alpha type.	0.999
A0A3F3PMC7	A0A3F3Q4L9	Proteasome subunit beta.	Proteasome subunit beta.	0.999
A0A3F3PMC7	A0A3F3QBV4	Proteasome subunit beta.	Proteasome subunit alpha type.	0.999
A0A3F3PMC7	A0A3F3QDG4	Proteasome subunit beta.	Proteasome subunit alpha type.	0.999
A0A3F3PSD9	A0A3F3PMC7	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
A0A3F3PSD9	A0A3F3PVR6	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
A0A3F3PSD9	A0A3F3PY82	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
A0A3F3PSD9	A0A3F3PYL1	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
A0A3F3PSD9	A0A3F3PZ89	Proteasome subunit alpha type.	Proteasome subunit beta; Belongs to the peptidase T1B family.	0.999
A0A3F3PSD9	A0A3F3Q3D2	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
A0A3F3PSD9	A0A3F3Q4L9	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
A0A3F3PSD9	A0A3F3QBV4	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
A0A3F3PSD9	A0A3F3QDG4	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
A0A3F3PVR6	A0A3F3PMC7	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
A0A3F3PVR6	A0A3F3PSD9	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999