STRINGSTRING
A0A3F3QGH4 A0A3F3QGH4 A0A3F3PRC9 A0A3F3PRC9 A0A3F3PRC5 A0A3F3PRC5 A0A3F3PR65 A0A3F3PR65 A0A3F3PPL8 A0A3F3PPL8 LSM5 LSM5 A0A3F3PMZ6 A0A3F3PMZ6 A0A3F3PLR7 A0A3F3PLR7 A0A3F3PLE0 A0A3F3PLE0 A0A3F3PLA0 A0A3F3PLA0 A0A3F3PK45 A0A3F3PK45 A0A3F3PK39 A0A3F3PK39 A0A3F3PHN1 A0A3F3PHN1 A0A3F3QJY0 A0A3F3QJY0 A0A3F3QJQ9 A0A3F3QJQ9 A0A3F3QJ76 A0A3F3QJ76 A0A3F3QHQ8 A0A3F3QHQ8 A0A3F3QFC6 A0A3F3QFC6 A0A3F3QFA4 A0A3F3QFA4 LSM3 LSM3 A0A3F3QCW7 A0A3F3QCW7 A0A3F3QCR7 A0A3F3QCR7 A0A3F3QAY0 A0A3F3QAY0 PAN2 PAN2 A0A3F3QA34 A0A3F3QA34 A0A3F3Q9B1 A0A3F3Q9B1 A0A3F3Q8C3 A0A3F3Q8C3 A0A3F3Q7A4 A0A3F3Q7A4 A0A3F3Q5N7 A0A3F3Q5N7 A0A3F3Q5F2 A0A3F3Q5F2 A0A3F3Q2L0 A0A3F3Q2L0 PAN3 PAN3 LSM1 LSM1 A0A3F3PZ81 A0A3F3PZ81 A0A3F3PY45 A0A3F3PY45 LSM4 LSM4 A0A3F3PTK3 A0A3F3PTK3 A0A3F3PT08 A0A3F3PT08
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A3F3QGH4Topoisomerase II associated protein. (842 aa)
A0A3F3PRC9Uncharacterized protein. (1104 aa)
A0A3F3PRC5Uncharacterized protein. (338 aa)
A0A3F3PR65WD domain protein. (409 aa)
A0A3F3PPL8Uncharacterized protein. (249 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (83 aa)
A0A3F3PMZ6Ribosomal protein S5 domain 2-type protein. (403 aa)
A0A3F3PLR73' exoribonuclease family, domain 1-domain-containing protein. (324 aa)
A0A3F3PLE0Uncharacterized protein. (1416 aa)
A0A3F3PLA0P-loop containing nucleoside triphosphate hydrolase protein. (1450 aa)
A0A3F3PK45CUE domain-containing protein. (192 aa)
A0A3F3PK39NOT2_3_5 domain-containing protein. (521 aa)
A0A3F3PHN1IEC3 subunit of the Ino80 complex, chromatin re-modelling-domain-containing protein. (739 aa)
A0A3F3QJY03' exoribonuclease family, domain 1-domain-containing protein. (269 aa)
A0A3F3QJQ9CCR4-NOT transcription complex, subunit 3. (620 aa)
A0A3F3QJ76Uncharacterized protein. (279 aa)
A0A3F3QHQ8RNB domain-containing protein. (1372 aa)
A0A3F3QFC6Exosome component EXOSC1/CSL4-domain-containing protein. (251 aa)
A0A3F3QFA4Nudix hydrolase domain-containing protein. (1241 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
A0A3F3QCW7Rcd1-domain-containing protein. (390 aa)
A0A3F3QCR7Mitotic control protein Dis3; Belongs to the RNR ribonuclease family. (1033 aa)
A0A3F3QAY0RING-type domain-containing protein. (856 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1155 aa)
A0A3F3QA34Translation elongation factor EF-1 subunit. (809 aa)
A0A3F3Q9B1RNB domain-containing protein. (1052 aa)
A0A3F3Q8C3Ribosomal protein S5 domain 2-type protein. (292 aa)
A0A3F3Q7A4Ribonuclease H-like domain-containing protein. (488 aa)
A0A3F3Q5N7CCR4-Not complex component, Not1-domain-containing protein. (2340 aa)
A0A3F3Q5F2Armadillo-type protein. (2288 aa)
A0A3F3Q2L0Sm domain-containing protein. (137 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exo [...] (664 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (196 aa)
A0A3F3PZ81Ribosomal protein S5 domain 2-type protein. (385 aa)
A0A3F3PY45Uncharacterized protein. (214 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (121 aa)
A0A3F3PTK3Uncharacterized protein. (359 aa)
A0A3F3PT08HIT-like domain-containing protein. (327 aa)
Your Current Organism:
Aspergillus welwitschiae
NCBI taxonomy Id: 1341132
Other names: A. welwitschiae, Aspergillus welwitschiae (Bres.) Henn., CBS 139.54, Ustilago welwitschiae
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