16 items (Aspergillus welwitschiae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A3F3PKB4	DNA-directed RNA polymerase. (373 aa)
	A0A3F3PM45	Uncharacterized protein. (546 aa)
	A0A3F3PNC9	RNA polymerase, subunit omega/K/RPB6. (160 aa)
	A0A3F3PWR5	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (121 aa)
	A0A3F3PXS9	SprT-like family-domain-containing protein. (715 aa)
	A0A3F3PY02	SAP30_Sin3_bdg domain-containing protein. (236 aa)
	A0A3F3Q1A1	Uncharacterized protein. (110 aa)
	A0A3F3Q2E3	RNA polymerase. (235 aa)
	A0A3F3Q850	A49-like RNA polymerase I associated factor-domain-containing protein. (493 aa)
	A0A3F3Q8V7	DNA-directed RNA polymerase, subunit N/Rpb10. (74 aa)
	A0A3F3Q987	Uncharacterized protein. (443 aa)
	A0A3F3QBJ8	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1236 aa)
	A0A3F3QCD1	Uncharacterized protein. (1498 aa)
	A0A3F3QDT6	RNA polymerase I-specific transcription initiation factor RRN3. (710 aa)
	A0A3F3QEJ5	DNA directed RNA polymerase. (74 aa)
	A0A3F3QIK2	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1680 aa)

Your Current Organism:

Aspergillus welwitschiae

NCBI taxonomy Id: 1341132
Other names: A. welwitschiae, Aspergillus welwitschiae (Bres.) Henn., CBS 139.54, Ustilago welwitschiae

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A3F3PKB4	A0A3F3PM45	DNA-directed RNA polymerase.	Uncharacterized protein.	0.776
A0A3F3PKB4	A0A3F3PNC9	DNA-directed RNA polymerase.	RNA polymerase, subunit omega/K/RPB6.	0.999
A0A3F3PKB4	A0A3F3PWR5	DNA-directed RNA polymerase.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.996
A0A3F3PKB4	A0A3F3PY02	DNA-directed RNA polymerase.	SAP30_Sin3_bdg domain-containing protein.	0.984
A0A3F3PKB4	A0A3F3Q1A1	DNA-directed RNA polymerase.	Uncharacterized protein.	0.998
A0A3F3PKB4	A0A3F3Q2E3	DNA-directed RNA polymerase.	RNA polymerase.	0.999
A0A3F3PKB4	A0A3F3Q850	DNA-directed RNA polymerase.	A49-like RNA polymerase I associated factor-domain-containing protein.	0.999
A0A3F3PKB4	A0A3F3Q8V7	DNA-directed RNA polymerase.	DNA-directed RNA polymerase, subunit N/Rpb10.	0.999
A0A3F3PKB4	A0A3F3Q987	DNA-directed RNA polymerase.	Uncharacterized protein.	0.999
A0A3F3PKB4	A0A3F3QBJ8	DNA-directed RNA polymerase.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
A0A3F3PKB4	A0A3F3QCD1	DNA-directed RNA polymerase.	Uncharacterized protein.	0.671
A0A3F3PKB4	A0A3F3QDT6	DNA-directed RNA polymerase.	RNA polymerase I-specific transcription initiation factor RRN3.	0.991
A0A3F3PKB4	A0A3F3QEJ5	DNA-directed RNA polymerase.	DNA directed RNA polymerase.	0.998
A0A3F3PKB4	A0A3F3QIK2	DNA-directed RNA polymerase.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
A0A3F3PM45	A0A3F3PKB4	Uncharacterized protein.	DNA-directed RNA polymerase.	0.776
A0A3F3PM45	A0A3F3PWR5	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.750
A0A3F3PM45	A0A3F3PY02	Uncharacterized protein.	SAP30_Sin3_bdg domain-containing protein.	0.722
A0A3F3PM45	A0A3F3Q850	Uncharacterized protein.	A49-like RNA polymerase I associated factor-domain-containing protein.	0.761
A0A3F3PM45	A0A3F3Q987	Uncharacterized protein.	Uncharacterized protein.	0.734
A0A3F3PM45	A0A3F3QBJ8	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.674