37 items (Aspergillus welwitschiae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A3F3QK24	Cyclin-like protein; Belongs to the cyclin family. (380 aa)
	A0A3F3PI17	Ankyrin repeat-containing domain protein. (201 aa)
	A0A3F3PKL1	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (709 aa)
	A0A3F3PL90	Histone H2B; Belongs to the histone H2B family. (140 aa)
	A0A3F3PLU3	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (111 aa)
	A0A3F3PLU4	Uncharacterized protein. (386 aa)
	A0A3F3PN44	Nitrogen regulatory protein area N terminus-domain-containing protein. (880 aa)
	A0A3F3PNC9	RNA polymerase, subunit omega/K/RPB6. (160 aa)
	A0A3F3PNE2	DNA-directed RNA polymerase. (157 aa)
	A0A3F3PNX2	Uncharacterized protein. (414 aa)
	A0A3F3PTB2	Transcription initiation factor IIF, beta subunit-domain-containing protein. (383 aa)
	A0A3F3PTH4	Uncharacterized protein. (498 aa)
	A0A3F3PTK6	DNA-directed RNA polymerase subunit E. (169 aa)
	A0A3F3PV42	Uncharacterized protein. (382 aa)
	A0A3F3PX47	Uncharacterized protein. (374 aa)
	A0A3F3PYH1	S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (349 aa)
	A0A3F3PZ59	DNA-directed RNA polymerase. (338 aa)
	A0A3F3PZH3	GATA-type domain-containing protein. (392 aa)
	A0A3F3PZI9	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family. (559 aa)
	A0A3F3Q1A1	Uncharacterized protein. (110 aa)
	A0A3F3Q211	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1747 aa)
	A0A3F3Q239	UbiD family decarboxylase. (391 aa)
	A0A3F3Q2E3	RNA polymerase. (235 aa)
	A0A3F3Q2H0	Transcription factor IIA, alpha/beta subunit. (289 aa)
	A0A3F3Q544	Fork head domain-domain-containing protein. (696 aa)
	A0A3F3Q5P8	Transcription factor TFIID-domain-containing protein. (262 aa)
	A0A3F3Q5R8	Cyclin-like protein; Belongs to the cyclin family. (507 aa)
	A0A3F3Q8I4	RPOL9 domain-containing protein. (122 aa)
	A0A3F3Q8V7	DNA-directed RNA polymerase, subunit N/Rpb10. (74 aa)
	A0A3F3Q938	Forkhead box protein L2. (716 aa)
	A0A3F3Q943	Kinase-like domain-containing protein. (553 aa)
	A0A3F3Q9D9	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1829 aa)
	A0A3F3QCP4	Flavin-containing amine oxidoreductase-domain containing protein. (1012 aa)
	A0A3F3QD88	Histone acetyltransferase. (402 aa)
	A0A3F3QEJ5	DNA directed RNA polymerase. (74 aa)
	A0A3F3QEN3	Concanavalin A-like lectin/glucanase domain-containing protein. (368 aa)
	A0A3F3QF29	Bromodomain-containing protein. (285 aa)

Your Current Organism:

Aspergillus welwitschiae

NCBI taxonomy Id: 1341132
Other names: A. welwitschiae, Aspergillus welwitschiae (Bres.) Henn., CBS 139.54, Ustilago welwitschiae

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A3F3PKL1	A0A3F3PL90	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Histone H2B; Belongs to the histone H2B family.	0.589
A0A3F3PKL1	A0A3F3PLU3	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.963
A0A3F3PKL1	A0A3F3PLU4	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Uncharacterized protein.	0.959
A0A3F3PKL1	A0A3F3PNC9	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	RNA polymerase, subunit omega/K/RPB6.	0.982
A0A3F3PKL1	A0A3F3PNE2	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	DNA-directed RNA polymerase.	0.982
A0A3F3PKL1	A0A3F3PTB2	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Transcription initiation factor IIF, beta subunit-domain-containing protein.	0.998
A0A3F3PKL1	A0A3F3PTH4	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Uncharacterized protein.	0.969
A0A3F3PKL1	A0A3F3PTK6	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	DNA-directed RNA polymerase subunit E.	0.974
A0A3F3PKL1	A0A3F3PZ59	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	DNA-directed RNA polymerase.	0.991
A0A3F3PKL1	A0A3F3Q1A1	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Uncharacterized protein.	0.972
A0A3F3PKL1	A0A3F3Q211	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.969
A0A3F3PKL1	A0A3F3Q2E3	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	RNA polymerase.	0.987
A0A3F3PKL1	A0A3F3Q2H0	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Transcription factor IIA, alpha/beta subunit.	0.980
A0A3F3PKL1	A0A3F3Q5P8	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Transcription factor TFIID-domain-containing protein.	0.985
A0A3F3PKL1	A0A3F3Q5R8	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Cyclin-like protein; Belongs to the cyclin family.	0.692
A0A3F3PKL1	A0A3F3Q8I4	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	RPOL9 domain-containing protein.	0.994
A0A3F3PKL1	A0A3F3Q8V7	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	DNA-directed RNA polymerase, subunit N/Rpb10.	0.981
A0A3F3PKL1	A0A3F3Q9D9	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.994
A0A3F3PKL1	A0A3F3QEJ5	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	DNA directed RNA polymerase.	0.974
A0A3F3PKL1	A0A3F3QK24	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Cyclin-like protein; Belongs to the cyclin family.	0.692