5 items (Streptomyces rapamycinicus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGP55229.1	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (534 aa)
	AGP55230.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (307 aa)
	AGP55231.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (353 aa)
	dppD-2	DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (341 aa)
	AGP55233.1	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily. (343 aa)

Your Current Organism:

Streptomyces rapamycinicus

NCBI taxonomy Id: 1343740
Other names: S. rapamycinicus NRRL 5491, Streptomyces rapamycinicus NRRL 5491

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGP55229.1	AGP55230.1	M271_18360	M271_18365	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.993
AGP55229.1	AGP55231.1	M271_18360	M271_18370	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.992
AGP55229.1	AGP55233.1	M271_18360	M271_18380	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	0.973
AGP55229.1	dppD-2	M271_18360	M271_18375	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.979
AGP55230.1	AGP55229.1	M271_18365	M271_18360	ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.993
AGP55230.1	AGP55231.1	M271_18365	M271_18370	ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.993
AGP55230.1	AGP55233.1	M271_18365	M271_18380	ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	0.987
AGP55230.1	dppD-2	M271_18365	M271_18375	ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.991
AGP55231.1	AGP55229.1	M271_18370	M271_18360	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.992
AGP55231.1	AGP55230.1	M271_18370	M271_18365	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.993
AGP55231.1	AGP55233.1	M271_18370	M271_18380	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	0.990
AGP55231.1	dppD-2	M271_18370	M271_18375	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.991
AGP55233.1	AGP55229.1	M271_18380	M271_18360	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.973
AGP55233.1	AGP55230.1	M271_18380	M271_18365	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.987
AGP55233.1	AGP55231.1	M271_18380	M271_18370	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.990
AGP55233.1	dppD-2	M271_18380	M271_18375	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.877
dppD-2	AGP55229.1	M271_18375	M271_18360	DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.979
dppD-2	AGP55230.1	M271_18375	M271_18365	DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.991
dppD-2	AGP55231.1	M271_18375	M271_18370	DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.991
dppD-2	AGP55233.1	M271_18375	M271_18380	DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	0.877