Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGP53665.1 | AGP59948.1 | M271_10270 | M271_42865 | Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the shikimate dehydrogenase family. | Aminodehydroquinate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.962 |
| AGP53665.1 | AGP61436.1 | M271_10270 | M271_50395 | Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the shikimate dehydrogenase family. | Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the shikimate dehydrogenase family. | 0.931 |
| AGP53665.1 | aroA | M271_10270 | M271_17845 | Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the shikimate dehydrogenase family. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.986 |
| AGP53665.1 | aroA-2 | M271_10270 | M271_48050 | Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the shikimate dehydrogenase family. | Hypothetical protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.933 |
| AGP53665.1 | aroB | M271_10270 | M271_10255 | Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the shikimate dehydrogenase family. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.993 |
| AGP53665.1 | aroC | M271_10270 | M271_10265 | Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the shikimate dehydrogenase family. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.983 |
| AGP53665.1 | aroK | M271_10270 | M271_10260 | Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the shikimate dehydrogenase family. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.996 |
| AGP53665.1 | aroQ | M271_10270 | M271_06155 | Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the shikimate dehydrogenase family. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.978 |
| AGP53665.1 | aroQ-3 | M271_10270 | M271_50405 | Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the shikimate dehydrogenase family. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.957 |
| AGP59948.1 | AGP53665.1 | M271_42865 | M271_10270 | Aminodehydroquinate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the shikimate dehydrogenase family. | 0.962 |
| AGP59948.1 | AGP61436.1 | M271_42865 | M271_50395 | Aminodehydroquinate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the shikimate dehydrogenase family. | 0.582 |
| AGP59948.1 | aroA | M271_42865 | M271_17845 | Aminodehydroquinate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.982 |
| AGP59948.1 | aroA-2 | M271_42865 | M271_48050 | Aminodehydroquinate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.980 |
| AGP59948.1 | aroC | M271_42865 | M271_10265 | Aminodehydroquinate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.955 |
| AGP59948.1 | aroK | M271_42865 | M271_10260 | Aminodehydroquinate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.978 |
| AGP59948.1 | aroQ | M271_42865 | M271_06155 | Aminodehydroquinate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.781 |
| AGP59948.1 | aroQ-3 | M271_42865 | M271_50405 | Aminodehydroquinate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.791 |
| AGP61436.1 | AGP53665.1 | M271_50395 | M271_10270 | Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the shikimate dehydrogenase family. | Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the shikimate dehydrogenase family. | 0.931 |
| AGP61436.1 | AGP59948.1 | M271_50395 | M271_42865 | Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the shikimate dehydrogenase family. | Aminodehydroquinate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.582 |
| AGP61436.1 | aroA | M271_50395 | M271_17845 | Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the shikimate dehydrogenase family. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.708 |
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