43 items (Streptomyces rapamycinicus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGP59770.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily. (518 aa)
	AGP51919.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily. (349 aa)
	AGP51920.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily. (283 aa)
	AGP52275.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (572 aa)
	AGP52276.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (275 aa)
	AGP52457.1	P-aminobenzoyl-glutamate transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (523 aa)
	AGP52485.1	ABC transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. (599 aa)
	AGP52486.1	Peptide ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (281 aa)
	AGP52494.1	Peptide ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (275 aa)
	AGP52495.1	ABC transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (590 aa)
	dppD	DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (337 aa)
	AGP52525.1	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily. (353 aa)
	AGP52651.1	Transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (537 aa)
	AGP52757.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily. (343 aa)
	AGP52758.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily. (276 aa)
	AGP53122.1	Peptide ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (309 aa)
	AGP53123.1	ABC transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (286 aa)
	AGP53913.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (285 aa)
	AGP53914.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily. (337 aa)
	AGP54812.1	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily. (726 aa)
	AGP54837.1	Peptide ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily. (375 aa)
	AGP54838.1	Peptide ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily. (380 aa)
	AGP54874.1	Membrane protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (564 aa)
	AGP54875.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (361 aa)
	AGP55221.1	Peptide ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily. (356 aa)
	AGP55222.1	Peptide ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily. (376 aa)
	dppD-2	DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (341 aa)
	AGP55233.1	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily. (343 aa)
	AGP55240.1	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily. (385 aa)
	dppD-3	DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (352 aa)
	AGP55246.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (671 aa)
	AGP55360.1	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily. (620 aa)
	dppD-4	DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (396 aa)
	AGP55444.1	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily. (351 aa)
	AGP57323.1	Amino acid transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (508 aa)
	AGP59635.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (308 aa)
	AGP59949.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (66 aa)
	AGP60814.1	ABC transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily. (341 aa)
	AGP60815.1	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily. (352 aa)
	AGP61064.1	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (290 aa)
	AGP61065.1	Peptide ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily. (355 aa)
	AGP61145.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily. (287 aa)
	AGP61146.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (263 aa)

Your Current Organism:

Streptomyces rapamycinicus

NCBI taxonomy Id: 1343740
Other names: S. rapamycinicus NRRL 5491, Streptomyces rapamycinicus NRRL 5491

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGP51919.1	AGP51920.1	M271_01410	M271_01415	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	0.885
AGP51919.1	AGP52275.1	M271_01410	M271_03220	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.516
AGP51919.1	AGP52276.1	M271_01410	M271_03225	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.505
AGP51919.1	AGP52485.1	M271_01410	M271_04280	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	ABC transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.488
AGP51919.1	AGP52486.1	M271_01410	M271_04285	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	Peptide ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.513
AGP51919.1	AGP52494.1	M271_01410	M271_04325	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	Peptide ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.506
AGP51919.1	AGP52495.1	M271_01410	M271_04330	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	ABC transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.483
AGP51919.1	AGP52525.1	M271_01410	M271_04480	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	0.491
AGP51919.1	AGP52758.1	M271_01410	M271_05660	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	0.517
AGP51919.1	AGP53913.1	M271_01410	M271_11570	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.515
AGP51919.1	AGP54837.1	M271_01410	M271_16350	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	Peptide ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	0.483
AGP51919.1	AGP55222.1	M271_01410	M271_18325	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	Peptide ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	0.498
AGP51919.1	AGP55233.1	M271_01410	M271_18380	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	0.468
AGP51919.1	AGP55240.1	M271_01410	M271_18415	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	0.469
AGP51919.1	AGP55360.1	M271_01410	M271_19055	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	0.491
AGP51919.1	AGP59770.1	M271_01410	M271_41970	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	0.499
AGP51919.1	AGP59949.1	M271_01410	M271_42870	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.422
AGP51919.1	AGP61064.1	M271_01410	M271_48510	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.499
AGP51919.1	AGP61145.1	M271_01410	M271_48915	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	0.498
AGP51920.1	AGP51919.1	M271_01415	M271_01410	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	0.885