STRINGSTRING
AGP51895.1 AGP51895.1 AGP52434.1 AGP52434.1 AGP51540.1 AGP51540.1 AGP51541.1 AGP51541.1 AGP51548.1 AGP51548.1 AGP51554.1 AGP51554.1 AGP51563.1 AGP51563.1 AGP51616.1 AGP51616.1 AGP57580.1 AGP57580.1 AGP51636.1 AGP51636.1 AGP59465.1 AGP59465.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGP51895.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (258 aa)
AGP52434.1ABC transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (278 aa)
AGP51540.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
AGP51541.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa)
AGP51548.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
AGP51554.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
AGP51563.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
AGP51616.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
AGP57580.1Glutamate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (256 aa)
AGP51636.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
AGP59465.1Arginine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (250 aa)
Your Current Organism:
Streptomyces rapamycinicus
NCBI taxonomy Id: 1343740
Other names: S. rapamycinicus NRRL 5491, Streptomyces rapamycinicus NRRL 5491
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