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AGP52224.1 AGP52224.1 AGP52225.1 AGP52225.1 AGP55568.1 AGP55568.1 AGP58671.1 AGP58671.1 AGP59498.1 AGP59498.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGP52224.13-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (345 aa)
AGP52225.1Fructose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (239 aa)
AGP55568.1Alcaligin biosynthesis enzyme; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (435 aa)
AGP58671.1Lysine 6-monooxygenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (495 aa)
AGP59498.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (339 aa)
Your Current Organism:
Streptomyces rapamycinicus
NCBI taxonomy Id: 1343740
Other names: S. rapamycinicus NRRL 5491, Streptomyces rapamycinicus NRRL 5491
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