27 items (Streptomyces rapamycinicus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGP51916.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (537 aa)
	AGP51917.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (309 aa)
	AGP51918.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (301 aa)
	AGP51919.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily. (349 aa)
	AGP51920.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily. (283 aa)
	dppD	DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (337 aa)
	AGP52525.1	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily. (353 aa)
	AGP52870.1	Glycosyl transferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (626 aa)
	AGP55098.1	Sugar hydrolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (519 aa)
	AGP55229.1	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (534 aa)
	AGP55230.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (307 aa)
	AGP55231.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (353 aa)
	dppD-2	DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (341 aa)
	AGP55233.1	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily. (343 aa)
	AGP55240.1	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily. (385 aa)
	dppD-3	DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (352 aa)
	AGP55242.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (325 aa)
	AGP55243.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (308 aa)
	AGP55244.1	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (547 aa)
	AGP55309.1	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (744 aa)
	AGP57229.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (299 aa)
	AGP57683.1	beta-N-acetylhexosaminidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glycosyl hydrolase 3 family. (640 aa)
	AGP57867.1	Penicillin-binding protein 2; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (714 aa)
	AGP58587.1	Cell division protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (650 aa)
	AGP60366.1	Beta-lactamase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (318 aa)
	AGP60368.1	Beta-lactamase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (300 aa)
	AGP61146.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (263 aa)

Your Current Organism:

Streptomyces rapamycinicus

NCBI taxonomy Id: 1343740
Other names: S. rapamycinicus NRRL 5491, Streptomyces rapamycinicus NRRL 5491

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGP51916.1	AGP51917.1	M271_01395	M271_01400	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.991
AGP51916.1	AGP51918.1	M271_01395	M271_01405	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.989
AGP51916.1	AGP51919.1	M271_01395	M271_01410	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	0.967
AGP51916.1	AGP51920.1	M271_01395	M271_01415	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	0.960
AGP51916.1	AGP52525.1	M271_01395	M271_04480	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	0.890
AGP51916.1	AGP55229.1	M271_01395	M271_18360	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.922
AGP51916.1	AGP55230.1	M271_01395	M271_18365	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.968
AGP51916.1	AGP55231.1	M271_01395	M271_18370	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.965
AGP51916.1	AGP55233.1	M271_01395	M271_18380	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	0.915
AGP51916.1	AGP55240.1	M271_01395	M271_18415	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	0.917
AGP51916.1	AGP55242.1	M271_01395	M271_18425	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.965
AGP51916.1	AGP55243.1	M271_01395	M271_18430	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.968
AGP51916.1	AGP55244.1	M271_01395	M271_18435	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.923
AGP51916.1	AGP61146.1	M271_01395	M271_48920	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.894
AGP51916.1	dppD	M271_01395	M271_04475	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.922
AGP51916.1	dppD-2	M271_01395	M271_18375	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.935
AGP51916.1	dppD-3	M271_01395	M271_18420	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.939
AGP51917.1	AGP51916.1	M271_01400	M271_01395	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.991
AGP51917.1	AGP51918.1	M271_01400	M271_01405	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.996
AGP51917.1	AGP51919.1	M271_01400	M271_01410	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.	0.993