21 items (Ascoidea rubescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1D2V9F1	Csm1 domain-containing protein. (429 aa)
	A0A1D2V9V4	WLM-domain-containing protein. (121 aa)
	A0A1D2VAE1	Cytokin_check_N domain-containing protein. (1035 aa)
	A0A1D2VB17	Cysteine proteinase. (381 aa)
	A0A1D2VBD5	CLP1_P domain-containing protein. (774 aa)
	A0A1D2VCU3	Cysteine proteinase. (208 aa)
	A0A1D2VDB9	Cytokin_check_N domain-containing protein. (1038 aa)
	A0A1D2VEL6	Uncharacterized protein. (190 aa)
	A0A1D2VEZ5	Uncharacterized protein. (255 aa)
	A0A1D2VGS0	Las1-domain-containing protein. (583 aa)
	A0A1D2VHC8	ULP_PROTEASE domain-containing protein. (1546 aa)
	A0A1D2VHK5	Uncharacterized protein. (471 aa)
	A0A1D2VIN1	RING-type domain-containing protein. (734 aa)
	A0A1D2VKK2	Uncharacterized protein. (230 aa)
	A0A1D2VKY6	Rad60-SLD domain-containing protein. (552 aa)
	A0A1D2VLR4	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (792 aa)
	A0A1D2VMP1	Ubiquitin-like domain-containing protein. (67 aa)
	A0A1D2VNU5	Ubiquitin-like protein. (100 aa)
	A0A1D2VQN3	Zf-MIZ-domain-containing protein. (341 aa)
	A0A1D2VRA9	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1280 aa)
	A0A1D2VRI8	Exonuclease. (179 aa)

Your Current Organism:

Ascoidea rubescens

NCBI taxonomy Id: 1344418
Other names: A. rubescens DSM 1968, Ascoidea rubescens DSM 1968

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1D2V9F1	A0A1D2VB17	Csm1 domain-containing protein.	Cysteine proteinase.	0.831
A0A1D2V9F1	A0A1D2VHC8	Csm1 domain-containing protein.	ULP_PROTEASE domain-containing protein.	0.882
A0A1D2V9V4	A0A1D2VB17	WLM-domain-containing protein.	Cysteine proteinase.	0.474
A0A1D2V9V4	A0A1D2VCU3	WLM-domain-containing protein.	Cysteine proteinase.	0.458
A0A1D2V9V4	A0A1D2VHC8	WLM-domain-containing protein.	ULP_PROTEASE domain-containing protein.	0.518
A0A1D2V9V4	A0A1D2VLR4	WLM-domain-containing protein.	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...]	0.601
A0A1D2V9V4	A0A1D2VMP1	WLM-domain-containing protein.	Ubiquitin-like domain-containing protein.	0.634
A0A1D2V9V4	A0A1D2VNU5	WLM-domain-containing protein.	Ubiquitin-like protein.	0.679
A0A1D2VAE1	A0A1D2VB17	Cytokin_check_N domain-containing protein.	Cysteine proteinase.	0.415
A0A1D2VAE1	A0A1D2VBD5	Cytokin_check_N domain-containing protein.	CLP1_P domain-containing protein.	0.641
A0A1D2VAE1	A0A1D2VCU3	Cytokin_check_N domain-containing protein.	Cysteine proteinase.	0.556
A0A1D2VAE1	A0A1D2VGS0	Cytokin_check_N domain-containing protein.	Las1-domain-containing protein.	0.611
A0A1D2VAE1	A0A1D2VHC8	Cytokin_check_N domain-containing protein.	ULP_PROTEASE domain-containing protein.	0.415
A0A1D2VB17	A0A1D2V9F1	Cysteine proteinase.	Csm1 domain-containing protein.	0.831
A0A1D2VB17	A0A1D2V9V4	Cysteine proteinase.	WLM-domain-containing protein.	0.474
A0A1D2VB17	A0A1D2VAE1	Cysteine proteinase.	Cytokin_check_N domain-containing protein.	0.415
A0A1D2VB17	A0A1D2VBD5	Cysteine proteinase.	CLP1_P domain-containing protein.	0.662
A0A1D2VB17	A0A1D2VCU3	Cysteine proteinase.	Cysteine proteinase.	0.862
A0A1D2VB17	A0A1D2VDB9	Cysteine proteinase.	Cytokin_check_N domain-containing protein.	0.415
A0A1D2VB17	A0A1D2VEL6	Cysteine proteinase.	Uncharacterized protein.	0.415