(10 nodes) Centromere complex assembly network (Ascoidea rubescens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1D2VF87	Uncharacterized protein. (116 aa)
	A0A1D2VCR3	SGS-domain-containing protein. (468 aa)
	A0A1D2VCN6	Uncharacterized protein. (1132 aa)
	A0A1D2VCL1	CHL4-domain-containing protein. (249 aa)
	A0A1D2VAW0	Scskp1-Sccdc4-Cpd peptide complex; Belongs to the SKP1 family. (177 aa)
	A0A1D2VPX9	Uncharacterized protein. (102 aa)
	A0A1D2VNV3	Histone-fold-containing protein. (152 aa)
	A0A1D2VNQ4	E3 ubiquitin ligase SCF complex, Skp subunit; Belongs to the SKP1 family. (175 aa)
	A0A1D2VHW4	Mis12-domain-containing protein. (318 aa)
	A0A1D2VH30	E3 ubiquitin ligase SCF complex, Skp subunit; Belongs to the SKP1 family. (170 aa)

Your Current Organism:

Ascoidea rubescens

NCBI taxonomy Id: 1344418
Other names: A. rubescens DSM 1968, Ascoidea rubescens DSM 1968

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1D2VAW0	A0A1D2VCR3	Scskp1-Sccdc4-Cpd peptide complex; Belongs to the SKP1 family.	SGS-domain-containing protein.	0.794
A0A1D2VCL1	A0A1D2VF87	CHL4-domain-containing protein.	Uncharacterized protein.	0.933
A0A1D2VCL1	A0A1D2VHW4	CHL4-domain-containing protein.	Mis12-domain-containing protein.	0.529
A0A1D2VCL1	A0A1D2VNV3	CHL4-domain-containing protein.	Histone-fold-containing protein.	0.903
A0A1D2VCN6	A0A1D2VNV3	Uncharacterized protein.	Histone-fold-containing protein.	0.964
A0A1D2VCR3	A0A1D2VAW0	SGS-domain-containing protein.	Scskp1-Sccdc4-Cpd peptide complex; Belongs to the SKP1 family.	0.794
A0A1D2VCR3	A0A1D2VH30	SGS-domain-containing protein.	E3 ubiquitin ligase SCF complex, Skp subunit; Belongs to the SKP1 family.	0.794
A0A1D2VCR3	A0A1D2VNQ4	SGS-domain-containing protein.	E3 ubiquitin ligase SCF complex, Skp subunit; Belongs to the SKP1 family.	0.794
A0A1D2VF87	A0A1D2VCL1	Uncharacterized protein.	CHL4-domain-containing protein.	0.933
A0A1D2VF87	A0A1D2VHW4	Uncharacterized protein.	Mis12-domain-containing protein.	0.550
A0A1D2VF87	A0A1D2VNV3	Uncharacterized protein.	Histone-fold-containing protein.	0.908
A0A1D2VH30	A0A1D2VCR3	E3 ubiquitin ligase SCF complex, Skp subunit; Belongs to the SKP1 family.	SGS-domain-containing protein.	0.794
A0A1D2VHW4	A0A1D2VCL1	Mis12-domain-containing protein.	CHL4-domain-containing protein.	0.529
A0A1D2VHW4	A0A1D2VF87	Mis12-domain-containing protein.	Uncharacterized protein.	0.550
A0A1D2VHW4	A0A1D2VNV3	Mis12-domain-containing protein.	Histone-fold-containing protein.	0.591
A0A1D2VNQ4	A0A1D2VCR3	E3 ubiquitin ligase SCF complex, Skp subunit; Belongs to the SKP1 family.	SGS-domain-containing protein.	0.794
A0A1D2VNV3	A0A1D2VCL1	Histone-fold-containing protein.	CHL4-domain-containing protein.	0.903
A0A1D2VNV3	A0A1D2VCN6	Histone-fold-containing protein.	Uncharacterized protein.	0.964
A0A1D2VNV3	A0A1D2VF87	Histone-fold-containing protein.	Uncharacterized protein.	0.908
A0A1D2VNV3	A0A1D2VHW4	Histone-fold-containing protein.	Mis12-domain-containing protein.	0.591