(20 nodes) Plasma membrane protein complex network (Ascoidea rubescens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1D2VKJ5	WD40 repeat-like protein. (464 aa)
	A0A1D2VL74	Adaptor protein complex AP-2 alpha subunit. (967 aa)
	A0A1D2VLH3	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (768 aa)
	A0A1D2VMH3	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1719 aa)
	A0A1D2VQE7	Guanine nucleotide binding protein, alpha subunit. (551 aa)
	A0A1D2VR43	Uncharacterized protein. (584 aa)
	A0A1D2VRT4	Guanine nucleotide-binding protein alpha subunit. (462 aa)
	A0A1D2V921	Putative high-affinity iron permease. (378 aa)
	A0A1D2V9H9	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (253 aa)
	A0A1D2VA82	Glycosyltransferase family 48 protein. (1759 aa)
	A0A1D2VAN4	Glycosyltransferase family 48 protein. (1651 aa)
	A0A1D2VBX2	ABC transporter domain-containing protein. (74 aa)
	A0A1D2VC29	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (616 aa)
	A0A1D2VE05	WD40 repeat-like protein. (527 aa)
	A0A1D2VED2	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (145 aa)
	A0A1D2VEX0	Glycosyltransferase family 48 protein. (1796 aa)
	A0A1D2VIB9	Uncharacterized protein. (714 aa)
	A0A1D2VIF9	Iron permease FTR1. (478 aa)
	A0A1D2V8Z7	Glycosyltransferase family 48 protein. (1958 aa)
	A0A1D2VJ67	PEP carboxykinase-like protein. (628 aa)

Your Current Organism:

Ascoidea rubescens

NCBI taxonomy Id: 1344418
Other names: A. rubescens DSM 1968, Ascoidea rubescens DSM 1968

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1D2V8Z7	A0A1D2VAN4	Glycosyltransferase family 48 protein.	Glycosyltransferase family 48 protein.	0.778
A0A1D2V8Z7	A0A1D2VEX0	Glycosyltransferase family 48 protein.	Glycosyltransferase family 48 protein.	0.935
A0A1D2V921	A0A1D2VIF9	Putative high-affinity iron permease.	Iron permease FTR1.	0.969
A0A1D2V9H9	A0A1D2VC29	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.918
A0A1D2V9H9	A0A1D2VED2	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.895
A0A1D2V9H9	A0A1D2VL74	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Adaptor protein complex AP-2 alpha subunit.	0.941
A0A1D2V9H9	A0A1D2VLH3	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.872
A0A1D2V9H9	A0A1D2VMH3	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.999
A0A1D2VA82	A0A1D2VAN4	Glycosyltransferase family 48 protein.	Glycosyltransferase family 48 protein.	0.778
A0A1D2VA82	A0A1D2VEX0	Glycosyltransferase family 48 protein.	Glycosyltransferase family 48 protein.	0.935
A0A1D2VAN4	A0A1D2V8Z7	Glycosyltransferase family 48 protein.	Glycosyltransferase family 48 protein.	0.778
A0A1D2VAN4	A0A1D2VA82	Glycosyltransferase family 48 protein.	Glycosyltransferase family 48 protein.	0.778
A0A1D2VAN4	A0A1D2VEX0	Glycosyltransferase family 48 protein.	Glycosyltransferase family 48 protein.	0.918
A0A1D2VC29	A0A1D2V9H9	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.918
A0A1D2VC29	A0A1D2VED2	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.999
A0A1D2VC29	A0A1D2VL74	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	Adaptor protein complex AP-2 alpha subunit.	0.999
A0A1D2VC29	A0A1D2VLH3	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.969
A0A1D2VC29	A0A1D2VMH3	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.934
A0A1D2VE05	A0A1D2VQE7	WD40 repeat-like protein.	Guanine nucleotide binding protein, alpha subunit.	0.931
A0A1D2VE05	A0A1D2VRT4	WD40 repeat-like protein.	Guanine nucleotide-binding protein alpha subunit.	0.959