4 items (Ascoidea rubescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1D2VE05	WD40 repeat-like protein. (527 aa)
	A0A1D2VQE7	Guanine nucleotide binding protein, alpha subunit. (551 aa)
	A0A1D2VKJ5	WD40 repeat-like protein. (464 aa)
	A0A1D2VRT4	Guanine nucleotide-binding protein alpha subunit. (462 aa)

Your Current Organism:

Ascoidea rubescens

NCBI taxonomy Id: 1344418
Other names: A. rubescens DSM 1968, Ascoidea rubescens DSM 1968

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1D2VE05	A0A1D2VQE7	WD40 repeat-like protein.	Guanine nucleotide binding protein, alpha subunit.	0.931
A0A1D2VE05	A0A1D2VRT4	WD40 repeat-like protein.	Guanine nucleotide-binding protein alpha subunit.	0.959
A0A1D2VKJ5	A0A1D2VQE7	WD40 repeat-like protein.	Guanine nucleotide binding protein, alpha subunit.	0.931
A0A1D2VKJ5	A0A1D2VRT4	WD40 repeat-like protein.	Guanine nucleotide-binding protein alpha subunit.	0.968
A0A1D2VQE7	A0A1D2VE05	Guanine nucleotide binding protein, alpha subunit.	WD40 repeat-like protein.	0.931
A0A1D2VQE7	A0A1D2VKJ5	Guanine nucleotide binding protein, alpha subunit.	WD40 repeat-like protein.	0.931
A0A1D2VQE7	A0A1D2VRT4	Guanine nucleotide binding protein, alpha subunit.	Guanine nucleotide-binding protein alpha subunit.	0.624
A0A1D2VRT4	A0A1D2VE05	Guanine nucleotide-binding protein alpha subunit.	WD40 repeat-like protein.	0.959
A0A1D2VRT4	A0A1D2VKJ5	Guanine nucleotide-binding protein alpha subunit.	WD40 repeat-like protein.	0.968
A0A1D2VRT4	A0A1D2VQE7	Guanine nucleotide-binding protein alpha subunit.	Guanine nucleotide binding protein, alpha subunit.	0.624