(9 nodes) Cation channel complex network (Ascoidea rubescens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1D2VM18	Uncharacterized protein. (694 aa)
	A0A1D2VAS9	DUF803-domain-containing protein. (303 aa)
	A0A1D2VD72	RING-type domain-containing protein. (1091 aa)
	A0A1D2VLT4	Uncharacterized protein. (650 aa)
	A0A1D2VLZ9	Voltage-gated potassium channel; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (638 aa)
	A0A1D2VM14	Uncharacterized protein. (596 aa)
	A0A1D2VMP9	EF-hand domain-containing protein. (1541 aa)
	A0A1D2VNQ6	Uncharacterized protein. (637 aa)
	A0A1D2VR43	Uncharacterized protein. (584 aa)

Your Current Organism:

Ascoidea rubescens

NCBI taxonomy Id: 1344418
Other names: A. rubescens DSM 1968, Ascoidea rubescens DSM 1968

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1D2VD72	A0A1D2VMP9	RING-type domain-containing protein.	EF-hand domain-containing protein.	0.756
A0A1D2VD72	A0A1D2VNQ6	RING-type domain-containing protein.	Uncharacterized protein.	0.696
A0A1D2VMP9	A0A1D2VD72	EF-hand domain-containing protein.	RING-type domain-containing protein.	0.756
A0A1D2VMP9	A0A1D2VNQ6	EF-hand domain-containing protein.	Uncharacterized protein.	0.793
A0A1D2VMP9	A0A1D2VR43	EF-hand domain-containing protein.	Uncharacterized protein.	0.967
A0A1D2VNQ6	A0A1D2VD72	Uncharacterized protein.	RING-type domain-containing protein.	0.696
A0A1D2VNQ6	A0A1D2VMP9	Uncharacterized protein.	EF-hand domain-containing protein.	0.793
A0A1D2VR43	A0A1D2VMP9	Uncharacterized protein.	EF-hand domain-containing protein.	0.967