40 items (Ascoidea rubescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1D2VNN2	Antiviral helicase. (1239 aa)
	A0A1D2V9L9	Ribosomal protein S5 domain 2-like protein. (326 aa)
	A0A1D2VA44	Cysteine proteinase. (1159 aa)
	A0A1D2VAD2	DEAD-domain-containing protein; Belongs to the DEAD box helicase family. (624 aa)
	A0A1D2VAV0	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
	A0A1D2VBM0	WD40 repeat-like protein. (422 aa)
	A0A1D2VC52	Tr-type G domain-containing protein. (997 aa)
	PAN3	PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exo [...] (583 aa)
	A0A1D2VDE2	Uncharacterized protein. (424 aa)
	A0A1D2VDE9	Ribosomal protein S5 domain 2-like protein. (252 aa)
	A0A1D2VEV1	Uncharacterized protein. (188 aa)
	A0A1D2VFX5	RNase_PH domain-containing protein. (416 aa)
	A0A1D2VGC1	RNase_PH domain-containing protein. (265 aa)
	A0A1D2VGV8	Exosome exoribonuclease. (295 aa)
	A0A1D2VGX2	Glycosyltransferase family 15 protein. (3159 aa)
	A0A1D2VHG0	Ribonuclease H-like protein. (724 aa)
	A0A1D2VHV4	Uncharacterized protein. (561 aa)
	A0A1D2VI26	YjeF N-terminal domain-like protein. (705 aa)
	A0A1D2VIE2	Uncharacterized protein. (827 aa)
	A0A1D2VIP0	Not3-domain-containing protein. (621 aa)
	A0A1D2VJJ4	DCP2-domain-containing protein. (211 aa)
	LSM3	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (92 aa)
	A0A1D2VJV7	PH domain-like protein. (176 aa)
	LSM1	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (142 aa)
	A0A1D2VK02	Scavenger mRNA decapping enzyme. (333 aa)
	A0A1D2VKI5	TPR-like protein. (1418 aa)
	A0A1D2VKR0	Sm domain-containing protein. (95 aa)
	A0A1D2VLF2	RNB-domain-containing protein. (1448 aa)
	A0A1D2VLV4	RNase_PH domain-containing protein. (325 aa)
	A0A1D2VLX6	Exosome complex exonuclease RRP40. (245 aa)
	A0A1D2VM43	Uncharacterized protein. (1478 aa)
	A0A1D2VM66	EXOSC1 domain-containing protein. (306 aa)
	A0A1D2VMC6	U6 snRNA-associated Sm-like protein LSm7. (99 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (181 aa)
	A0A1D2VPR5	RNB-domain-containing protein. (1129 aa)
	LSM5	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (84 aa)
	A0A1D2VPZ7	Transcriptional regulator. (173 aa)
	A0A1D2VQ48	CUE domain-containing protein. (196 aa)
	A0A1D2VQ97	Rcd1-domain-containing protein. (418 aa)
	A0A1D2VQS6	Exosome complex exonuclease RRP44; Belongs to the RNR ribonuclease family. (997 aa)

Your Current Organism:

Ascoidea rubescens

NCBI taxonomy Id: 1344418
Other names: A. rubescens DSM 1968, Ascoidea rubescens DSM 1968

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1D2V9L9	A0A1D2VAD2	A0A1D2V9L9	A0A1D2VAD2	Ribosomal protein S5 domain 2-like protein.	DEAD-domain-containing protein; Belongs to the DEAD box helicase family.	0.558
A0A1D2V9L9	A0A1D2VBM0	A0A1D2V9L9	A0A1D2VBM0	Ribosomal protein S5 domain 2-like protein.	WD40 repeat-like protein.	0.708
A0A1D2V9L9	A0A1D2VC52	A0A1D2V9L9	A0A1D2VC52	Ribosomal protein S5 domain 2-like protein.	Tr-type G domain-containing protein.	0.967
A0A1D2V9L9	A0A1D2VDE2	A0A1D2V9L9	A0A1D2VDE2	Ribosomal protein S5 domain 2-like protein.	Uncharacterized protein.	0.999
A0A1D2V9L9	A0A1D2VDE9	A0A1D2V9L9	A0A1D2VDE9	Ribosomal protein S5 domain 2-like protein.	Ribosomal protein S5 domain 2-like protein.	0.999
A0A1D2V9L9	A0A1D2VEV1	A0A1D2V9L9	A0A1D2VEV1	Ribosomal protein S5 domain 2-like protein.	Uncharacterized protein.	0.942
A0A1D2V9L9	A0A1D2VFX5	A0A1D2V9L9	A0A1D2VFX5	Ribosomal protein S5 domain 2-like protein.	RNase_PH domain-containing protein.	0.999
A0A1D2V9L9	A0A1D2VGC1	A0A1D2V9L9	A0A1D2VGC1	Ribosomal protein S5 domain 2-like protein.	RNase_PH domain-containing protein.	0.999
A0A1D2V9L9	A0A1D2VGV8	A0A1D2V9L9	A0A1D2VGV8	Ribosomal protein S5 domain 2-like protein.	Exosome exoribonuclease.	0.997
A0A1D2V9L9	A0A1D2VJJ4	A0A1D2V9L9	A0A1D2VJJ4	Ribosomal protein S5 domain 2-like protein.	DCP2-domain-containing protein.	0.672
A0A1D2V9L9	A0A1D2VJV7	A0A1D2V9L9	A0A1D2VJV7	Ribosomal protein S5 domain 2-like protein.	PH domain-like protein.	0.614
A0A1D2V9L9	A0A1D2VKI5	A0A1D2V9L9	A0A1D2VKI5	Ribosomal protein S5 domain 2-like protein.	TPR-like protein.	0.870
A0A1D2V9L9	A0A1D2VLF2	A0A1D2V9L9	A0A1D2VLF2	Ribosomal protein S5 domain 2-like protein.	RNB-domain-containing protein.	0.955
A0A1D2V9L9	A0A1D2VLV4	A0A1D2V9L9	A0A1D2VLV4	Ribosomal protein S5 domain 2-like protein.	RNase_PH domain-containing protein.	0.999
A0A1D2V9L9	A0A1D2VLX6	A0A1D2V9L9	A0A1D2VLX6	Ribosomal protein S5 domain 2-like protein.	Exosome complex exonuclease RRP40.	0.999
A0A1D2V9L9	A0A1D2VM43	A0A1D2V9L9	A0A1D2VM43	Ribosomal protein S5 domain 2-like protein.	Uncharacterized protein.	0.911
A0A1D2V9L9	A0A1D2VM66	A0A1D2V9L9	A0A1D2VM66	Ribosomal protein S5 domain 2-like protein.	EXOSC1 domain-containing protein.	0.999
A0A1D2V9L9	A0A1D2VNN2	A0A1D2V9L9	A0A1D2VNN2	Ribosomal protein S5 domain 2-like protein.	Antiviral helicase.	0.897
A0A1D2V9L9	A0A1D2VPR5	A0A1D2V9L9	A0A1D2VPR5	Ribosomal protein S5 domain 2-like protein.	RNB-domain-containing protein.	0.922
A0A1D2V9L9	A0A1D2VQS6	A0A1D2V9L9	A0A1D2VQS6	Ribosomal protein S5 domain 2-like protein.	Exosome complex exonuclease RRP44; Belongs to the RNR ribonuclease family.	0.997