24 items (Ascoidea rubescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1D2VL14	Suf domain-containing protein. (804 aa)
	A0A1D2VSL4	Uncharacterized protein. (171 aa)
	A0A1D2VS93	Uncharacterized protein. (437 aa)
	A0A1D2VQL8	Fip1 domain-containing protein. (715 aa)
	A0A1D2VQI8	Small nuclear ribonucleoprotein Sm D3. (100 aa)
	A0A1D2VQ98	Uncharacterized protein. (254 aa)
	A0A1D2VNF7	Nuclear cap-binding protein subunit 2. (134 aa)
	A0A1D2VHN8	RNA-binding domain-containing protein. (172 aa)
	A0A1D2VNE9	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (661 aa)
	A0A1D2VMC8	CID domain-containing protein. (778 aa)
	A0A1D2VJN1	LSM-domain-containing protein. (125 aa)
	A0A1D2VJI3	Cleavage and polyadenylation specificity factor subunit 2. (873 aa)
	A0A1D2VHM5	RNA-binding domain-containing protein. (228 aa)
	A0A1D2VA04	RRM domain-containing protein. (428 aa)
	A0A1D2VAQ8	Small nuclear ribonucleoprotein G. (78 aa)
	A0A1D2VB94	RRM domain-containing protein. (1266 aa)
	A0A1D2VC20	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (89 aa)
	A0A1D2VCP4	Uncharacterized protein. (1054 aa)
	A0A1D2VDL2	CPSF_A domain-containing protein. (1806 aa)
	A0A1D2VDT0	Uncharacterized protein. (358 aa)
	A0A1D2VE63	RRM domain-containing protein. (188 aa)
	A0A1D2VFQ0	Uncharacterized protein. (849 aa)
	CLP1	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. (481 aa)
	A0A1D2VHH1	WD40 repeat-like protein. (556 aa)

Your Current Organism:

Ascoidea rubescens

NCBI taxonomy Id: 1344418
Other names: A. rubescens DSM 1968, Ascoidea rubescens DSM 1968

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1D2VA04	A0A1D2VAQ8	A0A1D2VA04	A0A1D2VAQ8	RRM domain-containing protein.	Small nuclear ribonucleoprotein G.	0.825
A0A1D2VA04	A0A1D2VC20	A0A1D2VA04	A0A1D2VC20	RRM domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.831
A0A1D2VA04	A0A1D2VCP4	A0A1D2VA04	A0A1D2VCP4	RRM domain-containing protein.	Uncharacterized protein.	0.828
A0A1D2VA04	A0A1D2VDL2	A0A1D2VA04	A0A1D2VDL2	RRM domain-containing protein.	CPSF_A domain-containing protein.	0.946
A0A1D2VA04	A0A1D2VDT0	A0A1D2VA04	A0A1D2VDT0	RRM domain-containing protein.	Uncharacterized protein.	0.782
A0A1D2VA04	A0A1D2VE63	A0A1D2VA04	A0A1D2VE63	RRM domain-containing protein.	RRM domain-containing protein.	0.724
A0A1D2VA04	A0A1D2VFQ0	A0A1D2VA04	A0A1D2VFQ0	RRM domain-containing protein.	Uncharacterized protein.	0.949
A0A1D2VA04	A0A1D2VHH1	A0A1D2VA04	A0A1D2VHH1	RRM domain-containing protein.	WD40 repeat-like protein.	0.929
A0A1D2VA04	A0A1D2VHM5	A0A1D2VA04	A0A1D2VHM5	RRM domain-containing protein.	RNA-binding domain-containing protein.	0.838
A0A1D2VA04	A0A1D2VHN8	A0A1D2VA04	A0A1D2VHN8	RRM domain-containing protein.	RNA-binding domain-containing protein.	0.838
A0A1D2VA04	A0A1D2VJI3	A0A1D2VA04	A0A1D2VJI3	RRM domain-containing protein.	Cleavage and polyadenylation specificity factor subunit 2.	0.946
A0A1D2VA04	A0A1D2VJN1	A0A1D2VA04	A0A1D2VJN1	RRM domain-containing protein.	LSM-domain-containing protein.	0.772
A0A1D2VA04	A0A1D2VL14	A0A1D2VA04	A0A1D2VL14	RRM domain-containing protein.	Suf domain-containing protein.	0.966
A0A1D2VA04	A0A1D2VMC8	A0A1D2VA04	A0A1D2VMC8	RRM domain-containing protein.	CID domain-containing protein.	0.924
A0A1D2VA04	A0A1D2VNE9	A0A1D2VA04	A0A1D2VNE9	RRM domain-containing protein.	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.931
A0A1D2VA04	A0A1D2VNF7	A0A1D2VA04	A0A1D2VNF7	RRM domain-containing protein.	Nuclear cap-binding protein subunit 2.	0.818
A0A1D2VA04	A0A1D2VQ98	A0A1D2VA04	A0A1D2VQ98	RRM domain-containing protein.	Uncharacterized protein.	0.949
A0A1D2VA04	A0A1D2VQI8	A0A1D2VA04	A0A1D2VQI8	RRM domain-containing protein.	Small nuclear ribonucleoprotein Sm D3.	0.782
A0A1D2VA04	A0A1D2VQL8	A0A1D2VA04	A0A1D2VQL8	RRM domain-containing protein.	Fip1 domain-containing protein.	0.945
A0A1D2VA04	A0A1D2VS93	A0A1D2VA04	A0A1D2VS93	RRM domain-containing protein.	Uncharacterized protein.	0.949