80 items (Ascoidea rubescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1D2VKM3	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (713 aa)
	A0A1D2VKI8	Eukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner. (643 aa)
	A0A1D2VAX9	Uncharacterized protein. (610 aa)
	A0A1D2VB94	RRM domain-containing protein. (1266 aa)
	A0A1D2VBB6	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (498 aa)
	A0A1D2VBD4	Uncharacterized protein. (488 aa)
	A0A1D2VBG7	Ssu72-like protein. (205 aa)
	A0A1D2VC52	Tr-type G domain-containing protein. (997 aa)
	A0A1D2VC60	DEAD-domain-containing protein; Belongs to the DEAD box helicase family. (469 aa)
	A0A1D2VCE0	Nucleolar protein required for maturation of 18S rRNA; Belongs to the DEAD box helicase family. (396 aa)
	A0A1D2V8F2	Interdomain Rrm packing contributes To Rna recognition in the Rna15, Hrp1, anchor Rna 3. (162 aa)
	A0A1D2V9A8	Serine/threonine-protein phosphatase. (361 aa)
	A0A1D2VCM6	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family. (600 aa)
	A0A1D2VCP4	Uncharacterized protein. (1054 aa)
	A0A1D2VCR0	Uncharacterized protein. (288 aa)
	A0A1D2VD93	Uncharacterized protein. (1259 aa)
	A0A1D2VDF6	Uncharacterized protein. (65 aa)
	A0A1D2VDL2	CPSF_A domain-containing protein. (1806 aa)
	A0A1D2VDZ5	P-loop containing nucleoside triphosphate hydrolase protein. (1333 aa)
	A0A1D2VE09	Uncharacterized protein. (500 aa)
	A0A1D2VE63	RRM domain-containing protein. (188 aa)
	A0A1D2VEA7	NTF2-like protein. (176 aa)
	A0A1D2VER8	Uncharacterized protein. (1020 aa)
	A0A1D2VEV1	Uncharacterized protein. (188 aa)
	A0A1D2VFQ0	Uncharacterized protein. (849 aa)
	A0A1D2VFZ2	Fumarate reductase; Irreversibly catalyzes the reduction of fumarate to succinate. (496 aa)
	A0A1D2VGA0	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (580 aa)
	CLP1	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. (481 aa)
	A0A1D2VGR7	RRM domain-containing protein. (220 aa)
	A0A1D2VGX1	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (328 aa)
	A0A1D2VHH1	WD40 repeat-like protein. (556 aa)
	A0A1D2VHK9	RRM domain-containing protein. (235 aa)
	A0A1D2VHM5	RNA-binding domain-containing protein. (228 aa)
	A0A1D2VHN8	RNA-binding domain-containing protein. (172 aa)
	A0A1D2VHQ3	P-loop containing nucleoside triphosphate hydrolase protein. (449 aa)
	A0A1D2VHW8	Serine/threonine-protein phosphatase. (660 aa)
	A0A1D2VI44	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (348 aa)
	A0A1D2VID9	Uncharacterized protein. (244 aa)
	A0A1D2VIL1	RNA-binding domain-containing protein. (142 aa)
	A0A1D2VJ13	Uncharacterized protein. (837 aa)
	A0A1D2VJ29	CSN subunit 5A. (207 aa)
	A0A1D2VJ66	Uncharacterized protein. (411 aa)
	A0A1D2VJI3	Cleavage and polyadenylation specificity factor subunit 2. (873 aa)
	A0A1D2VJK2	GLE1-like protein. (264 aa)
	A0A1D2VK69	ARM repeat-containing protein. (1132 aa)
	A0A1D2VKG6	Polypeptide release factor. (449 aa)
	A0A1D2V9R8	Subunit of the compass complex, which methylates histone H3 on lys 4. (332 aa)
	A0A1D2VA04	RRM domain-containing protein. (428 aa)
	A0A1D2VA97	Smr domain-containing protein. (670 aa)
	A0A1D2VSC8	Uncharacterized protein. (316 aa)
	A0A1D2VSB1	Uncharacterized protein. (342 aa)
	A0A1D2VSA0	B56-domain-containing protein. (272 aa)
	A0A1D2VS93	Uncharacterized protein. (437 aa)
	A0A1D2VS85	B56-domain-containing protein. (303 aa)
	A0A1D2VS78	Actin depolymerizing protein. (383 aa)
	A0A1D2VS60	Uncharacterized protein. (555 aa)
	A0A1D2VRU3	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (317 aa)
	A0A1D2V8Y9	NTF2-like protein. (634 aa)
	A0A1D2VR92	Flavocytochrome c. (656 aa)
	A0A1D2VQL8	Fip1 domain-containing protein. (715 aa)
	A0A1D2VQJ9	Uncharacterized protein. (208 aa)
	A0A1D2VQJ6	Tr-type G domain-containing protein. (445 aa)
	A0A1D2VQE1	mRNA-capping enzyme subunit alpha; Second step of mRNA capping. Transfer of the GMP moiety of GTP to the 5'-end of RNA via an enzyme-GMP covalent reaction intermediate; Belongs to the eukaryotic GTase family. (431 aa)
	A0A1D2VQD1	FAD-dependent oxidoreductase-like protein. (669 aa)
	A0A1D2VQ98	Uncharacterized protein. (254 aa)
	A0A1D2VPB0	RRM domain-containing protein. (265 aa)
	A0A1D2VNF7	Nuclear cap-binding protein subunit 2. (134 aa)
	A0A1D2VNE9	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (661 aa)
	A0A1D2VNC4	Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (401 aa)
	A0A1D2VMV1	DWNN-domain-containing protein. (604 aa)
	A0A1D2VMT9	TYR_PHOSPHATASE_2 domain-containing protein. (689 aa)
	A0A1D2VMJ4	P-loop containing nucleoside triphosphate hydrolase protein. (259 aa)
	A0A1D2VMJ1	P-loop containing nucleoside triphosphate hydrolase protein. (541 aa)
	A0A1D2VMG7	mRNA cap guanine-N7 methyltransferase. (438 aa)
	A0A1D2VMC8	CID domain-containing protein. (778 aa)
	A0A1D2VLY4	ARM repeat-containing protein. (805 aa)
	A0A1D2VLD2	RNA-binding domain-containing protein. (588 aa)
	A0A1D2VL14	Suf domain-containing protein. (804 aa)
	A0A1D2VKW5	ATP-dependent helicase NAM7. (1006 aa)
	A0A1D2VKS1	DRMBL-domain-containing protein. (468 aa)

Your Current Organism:

Ascoidea rubescens

NCBI taxonomy Id: 1344418
Other names: A. rubescens DSM 1968, Ascoidea rubescens DSM 1968

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1D2V8F2	A0A1D2V9R8	A0A1D2V8F2	A0A1D2V9R8	Interdomain Rrm packing contributes To Rna recognition in the Rna15, Hrp1, anchor Rna 3.	Subunit of the compass complex, which methylates histone H3 on lys 4.	0.517
A0A1D2V8F2	A0A1D2VA04	A0A1D2V8F2	A0A1D2VA04	Interdomain Rrm packing contributes To Rna recognition in the Rna15, Hrp1, anchor Rna 3.	RRM domain-containing protein.	0.798
A0A1D2V8F2	A0A1D2VB94	A0A1D2V8F2	A0A1D2VB94	Interdomain Rrm packing contributes To Rna recognition in the Rna15, Hrp1, anchor Rna 3.	RRM domain-containing protein.	0.637
A0A1D2V8F2	A0A1D2VCP4	A0A1D2V8F2	A0A1D2VCP4	Interdomain Rrm packing contributes To Rna recognition in the Rna15, Hrp1, anchor Rna 3.	Uncharacterized protein.	0.602
A0A1D2V8F2	A0A1D2VDL2	A0A1D2V8F2	A0A1D2VDL2	Interdomain Rrm packing contributes To Rna recognition in the Rna15, Hrp1, anchor Rna 3.	CPSF_A domain-containing protein.	0.472
A0A1D2V8F2	A0A1D2VE63	A0A1D2V8F2	A0A1D2VE63	Interdomain Rrm packing contributes To Rna recognition in the Rna15, Hrp1, anchor Rna 3.	RRM domain-containing protein.	0.960
A0A1D2V8F2	A0A1D2VER8	A0A1D2V8F2	A0A1D2VER8	Interdomain Rrm packing contributes To Rna recognition in the Rna15, Hrp1, anchor Rna 3.	Uncharacterized protein.	0.625
A0A1D2V8F2	A0A1D2VHM5	A0A1D2V8F2	A0A1D2VHM5	Interdomain Rrm packing contributes To Rna recognition in the Rna15, Hrp1, anchor Rna 3.	RNA-binding domain-containing protein.	0.485
A0A1D2V8F2	A0A1D2VHN8	A0A1D2V8F2	A0A1D2VHN8	Interdomain Rrm packing contributes To Rna recognition in the Rna15, Hrp1, anchor Rna 3.	RNA-binding domain-containing protein.	0.481
A0A1D2V8F2	A0A1D2VJ13	A0A1D2V8F2	A0A1D2VJ13	Interdomain Rrm packing contributes To Rna recognition in the Rna15, Hrp1, anchor Rna 3.	Uncharacterized protein.	0.484
A0A1D2V8F2	A0A1D2VL14	A0A1D2V8F2	A0A1D2VL14	Interdomain Rrm packing contributes To Rna recognition in the Rna15, Hrp1, anchor Rna 3.	Suf domain-containing protein.	0.694
A0A1D2V8F2	A0A1D2VLD2	A0A1D2V8F2	A0A1D2VLD2	Interdomain Rrm packing contributes To Rna recognition in the Rna15, Hrp1, anchor Rna 3.	RNA-binding domain-containing protein.	0.429
A0A1D2V8F2	A0A1D2VNF7	A0A1D2V8F2	A0A1D2VNF7	Interdomain Rrm packing contributes To Rna recognition in the Rna15, Hrp1, anchor Rna 3.	Nuclear cap-binding protein subunit 2.	0.575
A0A1D2V8F2	A0A1D2VQ98	A0A1D2V8F2	A0A1D2VQ98	Interdomain Rrm packing contributes To Rna recognition in the Rna15, Hrp1, anchor Rna 3.	Uncharacterized protein.	0.539
A0A1D2V8F2	A0A1D2VS60	A0A1D2V8F2	A0A1D2VS60	Interdomain Rrm packing contributes To Rna recognition in the Rna15, Hrp1, anchor Rna 3.	Uncharacterized protein.	0.464
A0A1D2V8Y9	A0A1D2V9R8	A0A1D2V8Y9	A0A1D2V9R8	NTF2-like protein.	Subunit of the compass complex, which methylates histone H3 on lys 4.	0.418
A0A1D2V8Y9	A0A1D2VA04	A0A1D2V8Y9	A0A1D2VA04	NTF2-like protein.	RRM domain-containing protein.	0.691
A0A1D2V8Y9	A0A1D2VB94	A0A1D2V8Y9	A0A1D2VB94	NTF2-like protein.	RRM domain-containing protein.	0.691
A0A1D2V8Y9	A0A1D2VBD4	A0A1D2V8Y9	A0A1D2VBD4	NTF2-like protein.	Uncharacterized protein.	0.587
A0A1D2V8Y9	A0A1D2VC60	A0A1D2V8Y9	A0A1D2VC60	NTF2-like protein.	DEAD-domain-containing protein; Belongs to the DEAD box helicase family.	0.725