STRINGSTRING
OI25_2546 OI25_2546 OI25_4882 OI25_4882 msbA msbA OI25_6185 OI25_6185 OI25_4654 OI25_4654 OI25_2550 OI25_2550 OI25_1036 OI25_1036
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OI25_2546ABC transporter family protein; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components. (611 aa)
OI25_4882ABC transporter family protein; [O] COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components. (898 aa)
msbALipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. (597 aa)
OI25_6185ABC transporter family protein; [V] COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain. (1018 aa)
OI25_4654ABC transporter family protein; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components. (601 aa)
OI25_2550ABC transporter family protein; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components. (625 aa)
OI25_1036ABC transporter family protein; [O] COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components. (629 aa)
Your Current Organism:
Paraburkholderia fungorum
NCBI taxonomy Id: 134537
Other names: ATCC BAA-463, Burkholderia fungorum, Burkholderia fungorum Coenye et al. 2001, Burkholderia sp. LMG 16225, Burkholderia sp. LMG 16307, Burkholderia sp. LMG16225, Burkholderia sp. LMG16307, CCUG 31961, CIP 107096, DSM 17061, JCM 21562, LMG 16225, LMG:16225, NBRC 102489, P. fungorum, Paraburkholderia fungorum (Coenye et al. 2001) Sawana et al. 2015, strain Croize P763-2
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