STRINGSTRING
metK metK APD31607.1 APD31607.1 miaA miaA hflX hflX APD31610.1 APD31610.1 rnz rnz APD31612.1 APD31612.1 recJ recJ APD31615.1 APD31615.1 APD31617.1 APD31617.1 APD31618.1 APD31618.1 APD31619.1 APD31619.1 APD31620.1 APD31620.1 rfbA rfbA APD31623.1 APD31623.1 rfbB rfbB pdi pdi APD31978.1 APD31978.1 APD31979.1 APD31979.1 pepT pepT APD31981.1 APD31981.1 APD31982.1 APD31982.1 APD31983.1 APD31983.1 APD31984.1 APD31984.1 APD31985.1 APD31985.1 APD31986.1 APD31986.1 APD31987.1 APD31987.1 APD31988.1 APD31988.1 APD31989.1 APD31989.1 APD31990.1 APD31990.1 APD31991.1 APD31991.1 APD31992.1 APD31992.1 APD31993.1 APD31993.1 APD31994.1 APD31994.1 APD31995.1 APD31995.1 rfbD rfbD APD32140.1 APD32140.1 APD32671.1 APD32671.1 APD32672.1 APD32672.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
metKMethionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. (395 aa)
APD31607.1DUF3042 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (58 aa)
miaAtRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (294 aa)
hflXGTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. (414 aa)
APD31610.1Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa)
rnzRibonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. (309 aa)
APD31612.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (254 aa)
recJsingle-stranded-DNA-specific exonuclease RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. (733 aa)
APD31615.1DNA replication protein DnaD; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)
APD31617.1IS256 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa)
APD31618.1tRNA (adenine-N(1))-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
APD31619.1Nif3-like dinuclear metal center hexameric protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
APD31620.1ZIP family metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
rfbAGlucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (289 aa)
APD31623.1dTDP-4-dehydrorhamnose 3,5-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (197 aa)
rfbBdTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (348 aa)
pdiDeacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
APD31978.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)
APD31979.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa)
pepTPeptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. (407 aa)
APD31981.1Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (345 aa)
APD31982.1Nucleoside-diphosphate sugar epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)
APD31983.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)
APD31984.1Cell wall biosynthesis glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
APD31985.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (419 aa)
APD31986.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (119 aa)
APD31987.1Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)
APD31988.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (436 aa)
APD31989.1Rhamnosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa)
APD31990.1Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa)
APD31991.1Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
APD31992.1Phosphate/phosphonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)
APD31993.1LPS ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)
APD31994.1alpha-L-Rha alpha-1,3-L-rhamnosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
APD31995.1Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (384 aa)
rfbDdTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (284 aa)
APD32140.1Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa)
APD32671.1UDP-glucose 6-dehydrogenase; Catalyzes the formation of UDP-glucuronate from UDP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (401 aa)
APD32672.1Hyaluronan synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
Your Current Organism:
Streptococcus iniae
NCBI taxonomy Id: 1346
Other names: ATCC 29178, CCUG 27303, CIP 102508, DSM 20576, LMG 14520, LMG:14520, S. iniae, Streptococcus shiloi, strain PW
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