(13 nodes) Amino acid ABC transporter, permease protein, 3-TM domain, and ABC-type amino acid transport system, ATPase component, HisP-type network (Streptococcus iniae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APD31324.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
	APD31325.1	Glutamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (522 aa)
	APD31450.1	Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
	glnQ	Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology. (244 aa)
	APD31582.1	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
	APD31583.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (723 aa)
	APD31702.1	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. (284 aa)
	APD31703.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)
	APD32056.1	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
	APD32161.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
	APD32162.1	Glutamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
	APD32163.1	Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
	APD32164.1	Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)

Your Current Organism:

Streptococcus iniae

NCBI taxonomy Id: 1346
Other names: ATCC 29178, CCUG 27303, CIP 102508, DSM 20576, LMG 14520, LMG:14520, S. iniae, Streptococcus shiloi, strain PW

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APD31324.1	APD31325.1	BMF34_02165	BMF34_02170	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
APD31324.1	APD31450.1	BMF34_02165	BMF34_02910	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.962
APD31324.1	APD31583.1	BMF34_02165	BMF34_03610	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.956
APD31324.1	APD31702.1	BMF34_02165	BMF34_04225	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	0.642
APD31324.1	APD31703.1	BMF34_02165	BMF34_04230	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.934
APD31324.1	APD32056.1	BMF34_02165	BMF34_06110	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.878
APD31324.1	APD32162.1	BMF34_02165	BMF34_06665	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.851
APD31324.1	APD32163.1	BMF34_02165	BMF34_06670	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.938
APD31324.1	APD32164.1	BMF34_02165	BMF34_06675	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.954
APD31325.1	APD31324.1	BMF34_02170	BMF34_02165	Glutamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
APD31325.1	APD31450.1	BMF34_02170	BMF34_02910	Glutamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.783
APD31325.1	APD31582.1	BMF34_02170	BMF34_03605	Glutamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.945
APD31325.1	APD31583.1	BMF34_02170	BMF34_03610	Glutamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.858
APD31325.1	APD31702.1	BMF34_02170	BMF34_04225	Glutamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	0.430
APD31325.1	APD31703.1	BMF34_02170	BMF34_04230	Glutamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.700
APD31325.1	APD32056.1	BMF34_02170	BMF34_06110	Glutamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.712
APD31325.1	APD32161.1	BMF34_02170	BMF34_06660	Glutamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.945
APD31325.1	APD32162.1	BMF34_02170	BMF34_06665	Glutamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.650
APD31325.1	APD32163.1	BMF34_02170	BMF34_06670	Glutamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.587
APD31325.1	APD32164.1	BMF34_02170	BMF34_06675	Glutamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.609